Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1252 ATGTCGAAGGTGGTTTGTGTCACCGGAGCCAGCGGCGCCATTGGGTCATGGGtggtcctcctcctcctccagcGTGGCTACACTGTCCGTGCCACCGTCCAAGATATCAAGGATGAAAACGAGACCAAacatttggaggaaatggaaggAGCTAAGAGTCGTCTCCGTCTTTGTGAAATGGATCTTCTTGACATCAACTCCATTGCCGCTGCTGTAGAGGGTTGTTCTGGCGTAATCCACCTCGCATGTCCTAACATCATTGGCCAAGTCGAAGATCctgagAAGCAGATTTTGGAACCGGCAATAAAAGGAACGGTTAATGTGTTGAAGGCAGCGAAGGAAGCGGGGGTGGAGCGCGTGGTGGCGACTTCGTCGATCTCCGCCATTATGCCAAGTCCTAATTGGCCTGCTGATAAGATTAAGGGAGAAGAGTGCTGGACAGATCTTGACTACTGCAAGAAGAAGGGGTTGTACTATCCCATCGCAAAGACTCTAGCAGAGAAAGCAGGTTGGGACTTCGCTAAGGAGACAGATTTTGATGTGGTCATGATAAACCCTGGAACAGCATTGGGTCCTCTTATTCCACCAAGAATCAATTCAAGCATGGCCGTGCTTGTTAGTGTTCTCAAAGGTAATAATCACCCCTCAACAATACATCCAAATGGGCCTGCGCATTAG 678 0.4587 MSKVVCVTGASGAIGSWVVLLLLQRGYTVRATVQDIKDENETKHLEEMEGAKSRLRLCEMDLLDINSIAAAVEGCSGVIHLACPNIIGQVEDPEKQILEPAIKGTVNVLKAAKEAGVERVVATSSISAIMPSPNWPADKIKGEECWTDLDYCKKKGLYYPIAKTLAEKAGWDFAKETDFDVVMINPGTALGPLIPPRINSSMAVLVSVLKGNNHPSTIHPNGPAH 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1252 225 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 218 - -
Ssu9g1252 225 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 212 IPR036291 -
Ssu9g1252 225 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 218 - -
Ssu9g1252 225 CDD FR_SDR_e 5 212 - -
Ssu9g1252 225 Pfam NAD dependent epimerase/dehydratase family 5 196 IPR001509 -
Ssu9g1252 225 Gene3D - 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1252 Ssu-Chr9 46026239 46031349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1252 3 211 Monolignol Biosynthesis Gene Families AT5G58490 64.593 2.78e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1252 - - gmx:100806281 400.979