Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1243 ATGGCCGCCGCGTTGGAGTGCTGGTCGCGCCGCGCCACCGGCGACGAGGACGCCGTTGTCCTCGTGCAGCGACCGGAACTCGACCCGACGCCGCAGCCCAGAGACTCCTCCCTCGTCCACAGGAAGCTCCAGAGGCTCACGCGCAACGTCGCCGAGGCCCTCGCCTCCCTCAGAAACTCCCTCAACACCGGCGAGTCTTCCAAACCCGACGCGCCTCGCGGCCTCTTGCGGGCCGCCGTCGTCCGCAACGTCGCCCGCCTCTACCCCGGCACCCAGCTCCCCGAGAGGCTCGTCTGCAACATTCGCAAGCACTACGATTCCCTGCCCCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGATGTGTTTCTTCACATGAAGTTGATGGACCAAGCAACGGAGGATGAGCAGGCTGCGATTTTGATTCAAGAGGAGTGTGATGGTGAGATTCAGCTACAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCATGGCCTGCGATGTCGGGTGCGTTGGATAGTTACTCCATTTGCTGCAAGAAGATTCAAATCTTTGAGAAGAAAGGTTTCACCCTTGGGATTGTGCTTCTTCTTGTGCTGTCTGGTGGTGGGCAAGATAAGTTGGTCAGGACCCGGGTTGAAAGCGCTCTCAAGATTGCCATGAAGAGGCCGAAAGCCGGCGGCGTGAAGCTTCCCTTTGGGCTTTGTGGATGTCAAGAGGATAACTCCAAGGGGAGAGGACTTGGAGAGATTGAAGAAGATGGCGGCGATGCGTACTGTGGAAATGGGCTTGAGAATTTGAGCCAGAAGATTCAGCTTCAGGTGCCATTGCCTAGTTCATCTTTTCTTGTAATGGTAGATGAATGGCAGACTATTCAGTCAGGTGGGGATGAGATTGAAAAATGGTTGTTAAACTCAGATAGTCTTGAGTTTGTTGAACAGATTAGGCCCAATTCGTATAAGGGGATGTACATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGATCTGCTGACAGTGATGACTTGTGGGCATAGAAATATTTTGCAGTTTTGTGGTGTTTGTGTAGATGACAACCATGGGTTATGTGTAGTGACAAAATTTGTGGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAACTTCTGAGTAAGGATGTTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCATACAGAGACCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGCGATATGGGCTTTGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGATTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTGGTGACCCAGAGAGTGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAAATGATAACTGGTGAGGCAGCATATTCTGCATATTCACCTGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGACAAAGTGCTGGAACAACACCCCTTCAAAACGCCCACACTTCTCTGAAATTTTGGCAATATTGCTGCGACCAAACAACTACAATAGGTAA 1716 0.4959 MAAALECWSRRATGDEDAVVLVQRPELDPTPQPRDSSLVHRKLQRLTRNVAEALASLRNSLNTGESSKPDAPRGLLRAAVVRNVARLYPGTQLPERLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMDQATEDEQAAILIQEECDGEIQLQGSLFKLTFACNSPISWPAMSGALDSYSICCKKIQIFEKKGFTLGIVLLLVLSGGGQDKLVRTRVESALKIAMKRPKAGGVKLPFGLCGCQEDNSKGRGLGEIEEDGGDAYCGNGLENLSQKIQLQVPLPSSSFLVMVDEWQTIQSGGDEIEKWLLNSDSLEFVEQIRPNSYKGMYMGKKVGIEKLRGCEKGNSYEFELRKDLLTVMTCGHRNILQFCGVCVDDNHGLCVVTKFVEGGSVHDLMLKNKKLLSKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGFVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMITGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILAILLRPNNYNR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1243 571 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 567 - -
Ssu9g1243 571 ProSiteProfiles Protein kinase domain profile. 275 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1243 571 Gene3D Transferase(Phosphotransferase) domain 1 307 567 - -
Ssu9g1243 571 Coils Coil 43 63 - -
Ssu9g1243 571 PRINTS Tyrosine kinase catalytic domain signature 534 556 IPR001245 GO:0004672|GO:0006468
Ssu9g1243 571 PRINTS Tyrosine kinase catalytic domain signature 420 438 IPR001245 GO:0004672|GO:0006468
Ssu9g1243 571 PRINTS Tyrosine kinase catalytic domain signature 490 512 IPR001245 GO:0004672|GO:0006468
Ssu9g1243 571 PRINTS Tyrosine kinase catalytic domain signature 384 397 IPR001245 GO:0004672|GO:0006468
Ssu9g1243 571 SUPERFAMILY Protein kinase-like (PK-like) 324 563 IPR011009 -
Ssu9g1243 571 PANTHER SERINE-THREONINE PROTEIN KINASE 1 567 - -
Ssu9g1243 571 Pfam Protein tyrosine and serine/threonine kinase 348 562 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1243 Ssu-Chr9 45823023 45827396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1243 296 563 MAP Kinase Kinase Kinase AT2G17700 32.234 1.21e-49 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Ssu9g1243 PK_Tyr_Ser-Thr 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1243 - - gmx:100819097 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1243 9 45823023 45827396 Ssu9g1243 9 45823023 45827396 ECH
Ssu9g1243 9 45823023 45827396 Ssu6g2683 6 62347605 62351999 PCT