Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1230 ATGGATTTCAGACGCAGCACACGAAAGCAACCACCAATAGAAAACATCCTTGGTGGACACGTGCATGCATGGGACCTTCACCGCTCTAAAAAGACACAAAACCCAAACTCAAAACTAGTGCGCATAATTTTAAGCTCTTCCACGCAACACTCTCAATCCCAACTCTTCGTTCACACGATGGCGGGGTGCGTAACGGACATGGCTCAGGCAGCCGCATGCCGCAACGGCACAGCGGCCGCACACCTGAAAGTGATTTCCGTCTTCACGATTTTCGTGACCAGCGTGGTGGGCGTGTCCACGCCCGTCATGCTGGCACGATACTTTCAGGGAAAGTCCCTCTACGACATGGCCATCTTGGTGATCAAATGCTTCGCCGCCGGCGTCATTCTTGCCACCTCATTGGTCCACGTGTTGCCGGATGCCTTTGCTGCACTCTCCGACTGCCAGGTGGCATCGCAGCATCCTTGGAAGGACTTTCCCTTTGCAGGCCTGGTGACCCTCGGTGGGGTTCTGATGGCGCTGCTGGTGGACGCTGTTGCAAGCTCGCATGTGGAGCACGCGCACTACACGCCGGTGGAGACAGAGGAGAAGGACGGTGGTGGCGGTGAGTGGAGCATGGAGgtggttggtggtggtggagcaGAGAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAGGCTGGTGTCGCAGGTGTTGGAGATTGGGATCATCTTTCACTCTGTTATCATAGGAGTGACTATGGGGATGTCTCAGAACGTTTGCACCATTCGCCCACTTGTTGCTGCTTTGGCGTTTCATCAGATTTTTGAAGGCTTGGGCCTTGGTGGCTGCGTTGCTCAGGCTGGGTTTAGCTTTGGAACAACGGCGTACATGTGCTTCATGTTCTCGGTGACAACACCAATGGGGATAATTTTGGGGATGGTGTTATTCTCAGTGACTGGTTATGATGATAGCAACCCTAATGCCTTGATCATGGAAGGGTTACTAGGTTCAGTTTCATCGGGGATACTAATTTACATGGCTCTTGTTGACCTCATAGCTGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGTTGAAAAAGGTGTCTTTTATTGCATTAACTCTTGGCTCTGCTGCAATGTCAGTTCTCGCGCTTTGGGCTTGA 1155 0.5056 MDFRRSTRKQPPIENILGGHVHAWDLHRSKKTQNPNSKLVRIILSSSTQHSQSQLFVHTMAGCVTDMAQAAACRNGTAAAHLKVISVFTIFVTSVVGVSTPVMLARYFQGKSLYDMAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGVLMALLVDAVASSHVEHAHYTPVETEEKDGGGGEWSMEVVGGGGAERVEELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGLGLGGCVAQAGFSFGTTAYMCFMFSVTTPMGIILGMVLFSVTGYDDSNPNALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKVSFIALTLGSAAMSVLALWA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1230 384 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 62 384 - -
Ssu9g1230 384 TIGRFAM zip: ZIP zinc/iron transport family 68 384 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu9g1230 384 Pfam ZIP Zinc transporter 81 381 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu9g1230 384 PANTHER ZINC/IRON TRANSPORTER 62 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1230 Ssu-Chr9 45358215 45364162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1230 60 384 Inorganic Solute Cotransporters AT2G30080 66.185 5.94e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1230 K14709 - gmx:100784745 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1230 9 45358215 45364162 Ssu9g1230 9 45358215 45364162 ECH
Ssu6g2674 6 62172693 62178687 Ssu9g1230 9 45358215 45364162 ECH
Ssu9g1230 9 45358215 45364162 Ssu6g2674 6 62172693 62178687 PCT