Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1219 ATGTCTCCACAAAATCGGAAATTCCCAACACTCCATGCAGCATGCAGATTTTGTATCAAAGAAAGTATTCCTAAATGGGCTATGTCTGAGTCTGACATGCAACCTTTAAATGTCTCAGGCATGAATGAAGAAAATGTTGATCAGATTTGGAGTGGTAAACTATCCCAGTTGCTTCCAAAGGACCCTGAGTTGGAGGCTATGGATGGTGCTGCTGCTAGTAGTTCAACTGCAAATCGAAAGCGGAAAAGCTTGAGGGATTCAAAGGCCAACATACCTAAGTGCCAAAGCAATGGATTGCCTCTCCGGATGCTAAGATCAAATAAGAGGGTGCAGAAGGTGTCTGCCCCTTCTCTGTTACATCATAAACCTCTAAATGTTCTGTCTTGCTTGATAGACAGCCACATCATCTTACCGAGGTCTAAGGTTTATTATAGGGTGAAAGGCAGGAACTGTACAGTCCGTACTTTGGCTGATGGGAAAATAACTCGCGATGGAATCAAGTGTAACTGTTGCCTTGCAATATACAGTTTTGTTGGCTTTGAAAATCATGCTAGTGGCAGTAGTACCTGCAGACCCTCTGCTAGTATATTTTTGGAAGATGGTAAATCACTGTTGGATTGCCAGATACAAATGATGCAAGGTCATAAGACAAGGGAAACTAGTGGAAAATCATTCAGTGATTTGTCTCTAGCCGAGAATGACTACATTTGTTCTGTTTGCCACTATGGTGGTGAACTTATTTTATGTGATCAATGTCCGTCTTCATTTCATAAGATGTGTCTTGGTTTGGAGGATATCCCTAATGGTGACTGGTTTTGTCCATCATGTCGTTGCGGGATTTGTGGCCAAAGGAAAATTGATGGAGACGAGATTGGAGATTTCCTTACTTGCGTTCAATGTGAACATAAATATCATGTTAGGTGCCTGCAAAATGGAGCTGTAGATACATCAAGATATCTTGGAAACTGGTTCTGTGGAAAAGACTGTGAAAAGATATATGAGGGCCTTCATAAATTATTAGGAAAGCCAGTTTCAGTGGGTGTGGACAATCTAACTTGGACATTGGAGAAGTTTATCAACCCTGGCAGTTGTGATCTTGATAGTATTAAAAGTGAATTATTGGCAGAAAGTTACAGCAAACTCAATCTTGCTCTTTTGGTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCTTTCTCTAGCAGAGATCTCGTGGAAGATGTTATATTCAGCAGATGGTCAGAGCTTAACCGATTAAATTTCCAGGGTTTCTATACTGTGCTACTTGAGAGAAATGAAGAACTGATCAGTGTGGCAACTGTTAGGATATATGGGAAGAAGGTAGCAGAAGTACCTCTTATTGGTACCAGATTACAATATCGTCGACATGGAATGTGTCGCATTTTAATGAATGAGCTTGAAAAGaAGCTCATGCAATTAGGTGTGGAGAGGCTTGTTTTGCCTGCTGTTCCTAGTGTGCTAGAAACATGGACTGGCTCTTTTGGCTTTGCAAAGATGACTAATTTTGAGAGATCTCAATTTCTGGACTATACTTTCCTAGATTTTCAGGGTACCATCATGTGCCAGAAGCTGTTGATGAAGATTCCATCTCCAGATTCAGTTTTGTTAATAGAGTCACAACCAAAATGTGATGTTTTCTCTGGAAGTTGCTGTGTTAACTTCAGTAAGTCTAGTCCACTATCTGATGTATACCGAGTAGAAGAGAATGACAAAGGAGGGATGGTGGATCAACAAATGGAGGATACTTGTGCAGGCAACAATGATCATGTTATTGGTGCTATTGACCCAGTCACCATGGTGGAGCAACCAAGTCCTGGGGATCAACAGTGCCAGAATGGAACAACCAGCTCAGAGTGCTCTATTGATAAACTAATTGACAGGAATAATGGCACGTATAAGTTCTTCTACACACGAAAGAAAGTGAGGAAGGCATGTGAAGGGTTTAGCATGCCATTATGA 1980 0.4106 MSPQNRKFPTLHAACRFCIKESIPKWAMSESDMQPLNVSGMNEENVDQIWSGKLSQLLPKDPELEAMDGAAASSSTANRKRKSLRDSKANIPKCQSNGLPLRMLRSNKRVQKVSAPSLLHHKPLNVLSCLIDSHIILPRSKVYYRVKGRNCTVRTLADGKITRDGIKCNCCLAIYSFVGFENHASGSSTCRPSASIFLEDGKSLLDCQIQMMQGHKTRETSGKSFSDLSLAENDYICSVCHYGGELILCDQCPSSFHKMCLGLEDIPNGDWFCPSCRCGICGQRKIDGDEIGDFLTCVQCEHKYHVRCLQNGAVDTSRYLGNWFCGKDCEKIYEGLHKLLGKPVSVGVDNLTWTLEKFINPGSCDLDSIKSELLAESYSKLNLALLVMHECFEPLKESFSSRDLVEDVIFSRWSELNRLNFQGFYTVLLERNEELISVATVRIYGKKVAEVPLIGTRLQYRRHGMCRILMNELEKKLMQLGVERLVLPAVPSVLETWTGSFGFAKMTNFERSQFLDYTFLDFQGTIMCQKLLMKIPSPDSVLLIESQPKCDVFSGSCCVNFSKSSPLSDVYRVEENDKGGMVDQQMEDTCAGNNDHVIGAIDPVTMVEQPSPGDQQCQNGTTSSECSIDKLIDRNNGTYKFFYTRKKVRKACEGFSMPL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1219 659 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 371 538 IPR000182 GO:0016407
Ssu9g1219 659 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 332 IPR013083 -
Ssu9g1219 659 SUPERFAMILY FYVE/PHD zinc finger 216 277 IPR011011 -
Ssu9g1219 659 ProSiteProfiles Zinc finger PHD-type profile. 234 279 IPR019787 -
Ssu9g1219 659 Pfam PHD-finger 236 278 IPR019787 -
Ssu9g1219 659 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 586 - -
Ssu9g1219 659 PANTHER PHD ZINC FINGER PROTEIN 2 586 - -
Ssu9g1219 659 MobiDBLite consensus disorder prediction 69 96 - -
Ssu9g1219 659 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 277 IPR013083 -
Ssu9g1219 659 Pfam Acetyltransferase (GNAT) family 413 490 IPR000182 GO:0016407
Ssu9g1219 659 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 395 512 IPR016181 -
Ssu9g1219 659 Gene3D - 376 537 - -
Ssu9g1219 659 Pfam Tify domain binding domain 159 211 IPR032308 -
Ssu9g1219 659 SMART PHD_3 278 329 IPR001965 -
Ssu9g1219 659 SMART PHD_3 236 277 IPR001965 -
Ssu9g1219 659 CDD NAT_SF 427 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1219 Ssu-Chr9 45043843 45051749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1219 102 475 PHD Transcription Factor Family AT5G58610 53.018 2.31e-126 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ssu9g1219 Acetyltransf_1 0.0001 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1219 - - gmx:100814680 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1219 9 45043843 45051749 Ssu9g1219 9 45043843 45051749 ECH
Ssu9g1219 9 45043843 45051749 Ssu6g2659 6 61843970 61850706 PCT