Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1208 ATGCCGACGCCGGTAAGCACAGCGAGGCAATGCCTGACGGAGGAGGCGGCGCGTGCGCTGGACGACGCCGTGACGGTGGCCCGCCGGCGCAGCCACGCCCAGACCACCTCCCTCCACGCCGTCTCCGCCCTGCTTGCCCTCCCCTCCGCCGCCCTCCGCGACGCCTGCGCCCGCTGCCGCAGCTGCTCGTATTCCCCCCGCCTCCAGTTCCGCGCCCTCGAACTCTCCGTCGGCGTCTCCCTCGACCGCCTCCCCACCGCCAAAtccggcggcggcggcggcggggGCGACGAGGGCCCGCCCGTGTCGAACTCCCTCATGGCCGCCATCAAGCGCTCCCAGGCCAACCAGCGGCGCCACCCCGACAGCTTTCACCTCATGCAGATGatgcagcagcagcagcaaacGACGTCGCTGCTAAAGGTCGAACTCAAGCACTTCATTCTCTCCATCCTCGACGACCCCATCGTGAGCCGCGTCTTTGGCGAAGCCGGCTTCCGCAGCTACGACATCAAGCTCGCGCTGCTCCAGCCGCCTCCGCCTTCCAGAATCTTCCCCCGCCTGACCCCTCCGGTTTTCCTCTGCAACCTCGAACCGGTTCAGAGCGGTTCCAGGCTCGACGAGAATTGCCGCAGAATCGTCGAGGTGGTGGCACGGAAGACCAAGAGGAACCCTCTCCTGATGGGTGTCTATGCGAAGAGCGCTCTCGAGAGTTTCGTCGAATGCGTGAAAGCGGGGGGCAAAGGTGGGGTCTTGCCCTGCGAGCTCGCTGGCTTGAGCGTGGTCTCGGTGGAGAAGGAGGTCGCCGAGTTCGTGAGGGAAGGTGGGAGGAGCGGCGAGAGGATTTTCGACGAAGTGGGTCGTTTGCTGGAGCGGTGTTCGGGTGCGGGCGTCGCCGTCTGTTTCGGGGAGATTGAGGTTTTTGTTGGCGGGGTGGGGAGTGAGGGGTTCGTTGTTTCGCAGTTAACGAGGTTGTTGGCGGTTCATGGTGGGAAGCTGTGGTTGGTGGGCGTGGCGGGAACCTCTGAGGCTTATTCTAAGTTTCTGAGGTTGTTCCCTACTGTTGACAAGGATTGGGATCTGCATCTGCTGACCATGACCTCTGCCACCCCTTCCATGGAAGGACTCTACCCTAAGTCCAGCTTGATGGGGTCCTTTGTGCCCCTTGGTGGGTTCTTTTCTACACCTTCTGAGTTCAAAAACCCCTTAAGCTGTACGAATGCGTCATCTTTAACTCGGTGTGACACATGCAATGAAAAGTATGAACAAGAAGTTGCTGATAATTTGAAGGTAGGCCCTGCTACTTCGGCATCTGGTTACTCAACGAGCTTGCCTTGGTTACAAAAGGTTAATGTGGACACAGATAGAGGATTGGATGTGGCAAAGACTAATGAAGAAAACACAAGCTTGAATGCGAAGATCTTTGGATTGCAAAGGAAATGGAGTGATATTTGTCAACGTCTTCATCAAAACCGATCATTACCTGAATTTGATATCACCAAAACAAGGTTCCAAGCTCCTTCCCATGAGGGGTTTCAATTTGGTCCAGGAAGTAGCAGCAAAGGTCCACCCCATAGTGAAATCCAATATTCTAATCAAATTTCCTACATGTCTAAAGAGTCACACAGTGCATTTCCATTTAAACAGATATTACCAGTCTCAGCACCTTTTGATTCTGTTAGTATCACTGATGAAGCAGACCACATACCAAAAGTTTCAAAAAGTGATGTGCAGAGTGCTTGGGTTTCTCCTTCCCCTAAGGCCACCATGAGTCTGCTTGATCACACATCATCTTCAACCCTTACTCCTGTGACCACAGATTTGGGATTGGGAACAATATATACATCATCTGCTCATGAGCCAGACACCCCAAAACTAAGTGATCATAAGAAGCATCTTCAGCACTTGTCAGACTCCCTTTCAACTGATTTTGATGCTGTGAATGAGAGTACTTCACACCAAATTGCTAGATCTTCTTCCTGCTCTGGTCCAAATTTAGAAGGGAAATTTGAAACAGTAGATTTCAAGTCAGTTTACCATCTTCTCACTGAAAAGGTTGGCAAGCAGGATGAGGCCATATATGCCATCAATCGAACTGTGTCCCGCTGTAGATCCGGTGCTGGAAAGCGTAGTGGCTCACATGTTAGAGCAGACATATGGCTTGCTTTACTTGGACCAGATAGacttggaaaaagaaaagttgctTCAGCACTTGCAGAGATTTTGTTTGGAAACAAACAAAGCCTAATCACTGTGGATTTGAGCTCCCAAGACAGGTGTTACCTGTCAAACTCTATTTTTGAATTCCAAAATTCATATTGTCATGATGTGCTTATGAGGAAGACAGTTGTGGACTACATTGCTGGGGAGTTGAGTAAAAAGCCACATTCAGTTGTCTGTCTTGAAAATGTAGATCAAGCTGATTTTCTGGTGCAGAATAGTTTGTTCCAAGCAATAAGAACAGGTAAATTCCCATACTCACATGGAAGGGAAATCAGCATCAACAATGCAGTCTTTATTGTAACCTCAAGTGTGTTTAAAGGAAGTGTCTCTTTTGATTTGGAGGAAGAGACTAAAATGTTTCCTGAGGAAAGAATTCTAGAAGCTAAAAGATGTCAAATGCAATTATCACTTGGACATGCTTCTGAGGATGCCAAAAGGAGTGGTTGCACTAATGTGAAGGTTGCACAGAGAAAAGGGACCTCCAAAACAAcacttttgaataaaagaaagcTAATAGAAAGTGGTGATTCCAAAGAGAAAGCATCATGCAAGACACTGAAACAAGTCAAGGATGCATCATGGTCCTATCTGGATCTTAATATGCCTCTTGAGGAGGTTGAAGAGGGCAACAATTACAATGATTATGAAAGTGAATCCATAGTTGAAAATTCTGGAACCTGGTTAAATGATTTGTGTGATCAAATTGATGAAAAAGTGGTTTTCAAGCCATTCAATTTTGATTCTCTTGCTGAGCAAGTAATAAAAAGCATTGAcatacaatttcaaaagatGTTTGGATCAGAGTTTATGCTGGAAATTGAGTATGAGGTCATGGCACAGATACTTGCAGCTGCTTGGTTATCAGACAAGAAAAACGCAGTGGAGGATTGGGTTGAACATGTTCTTGGCAGAAGCTTTGCTGAAGCTCAAGAGAAGTACCACCTTGCACCTGAATATGTGATGAAACTGGTTAACTGTGAAAGAATTTTTGTGGAAGAACAATCTCCTGGAGTATGCCTTCCAGCTAGAATTAACTTGAACTGA 3267 0.4708 MPTPVSTARQCLTEEAARALDDAVTVARRRSHAQTTSLHAVSALLALPSAALRDACARCRSCSYSPRLQFRALELSVGVSLDRLPTAKSGGGGGGGDEGPPVSNSLMAAIKRSQANQRRHPDSFHLMQMMQQQQQTTSLLKVELKHFILSILDDPIVSRVFGEAGFRSYDIKLALLQPPPPSRIFPRLTPPVFLCNLEPVQSGSRLDENCRRIVEVVARKTKRNPLLMGVYAKSALESFVECVKAGGKGGVLPCELAGLSVVSVEKEVAEFVREGGRSGERIFDEVGRLLERCSGAGVAVCFGEIEVFVGGVGSEGFVVSQLTRLLAVHGGKLWLVGVAGTSEAYSKFLRLFPTVDKDWDLHLLTMTSATPSMEGLYPKSSLMGSFVPLGGFFSTPSEFKNPLSCTNASSLTRCDTCNEKYEQEVADNLKVGPATSASGYSTSLPWLQKVNVDTDRGLDVAKTNEENTSLNAKIFGLQRKWSDICQRLHQNRSLPEFDITKTRFQAPSHEGFQFGPGSSSKGPPHSEIQYSNQISYMSKESHSAFPFKQILPVSAPFDSVSITDEADHIPKVSKSDVQSAWVSPSPKATMSLLDHTSSSTLTPVTTDLGLGTIYTSSAHEPDTPKLSDHKKHLQHLSDSLSTDFDAVNESTSHQIARSSSCSGPNLEGKFETVDFKSVYHLLTEKVGKQDEAIYAINRTVSRCRSGAGKRSGSHVRADIWLALLGPDRLGKRKVASALAEILFGNKQSLITVDLSSQDRCYLSNSIFEFQNSYCHDVLMRKTVVDYIAGELSKKPHSVVCLENVDQADFLVQNSLFQAIRTGKFPYSHGREISINNAVFIVTSSVFKGSVSFDLEEETKMFPEERILEAKRCQMQLSLGHASEDAKRSGCTNVKVAQRKGTSKTTLLNKRKLIESGDSKEKASCKTLKQVKDASWSYLDLNMPLEEVEEGNNYNDYESESIVENSGTWLNDLCDQIDEKVVFKPFNFDSLAEQVIKSIDIQFQKMFGSEFMLEIEYEVMAQILAAAWLSDKKNAVEDWVEHVLGRSFAEAQEKYHLAPEYVMKLVNCERIFVEEQSPGVCLPARINLN 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1208 1088 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Ssu9g1208 1088 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1088 - -
Ssu9g1208 1088 Gene3D - 10 177 IPR036628 -
Ssu9g1208 1088 MobiDBLite consensus disorder prediction 512 527 - -
Ssu9g1208 1088 Gene3D - 649 888 IPR027417 -
Ssu9g1208 1088 SUPERFAMILY Double Clp-N motif 12 124 IPR036628 -
Ssu9g1208 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 670 845 IPR027417 -
Ssu9g1208 1088 MobiDBLite consensus disorder prediction 508 527 - -
Ssu9g1208 1088 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1208 Ssu-Chr9 44845503 44851309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1208 - - gmx:100776148 1818.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1208 9 44845503 44851309 Ssu6g2645 6 61674685 61675602 PCT