Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1196 ATGGAGGTTTCATCATGGGAACAAAGTGTCACTTATTCCATCAACGTAATCTACCTTCTCTTCTCTGCGTACCTCGTCTTTGTAATGCAGATTGGCTTTGCCATGATATGTGCAGGTTCCGTGCGTGCCAAAAATGCCATGAACACAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTTGGTTTTGCATTTGCATATGGAAGTTCCAACCCTTTCATTGGTACTGATTTGTTTGCTCTGGCCCACATTCCAAATGGCACTTACGACTACGCTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCCGTATCAGGCATCACAAGTGGGTCTATAGCTGAGAGAACCCAATTCAGTGCCTAtcttgttttctcatttttcctCAGTGGGTTTGTGTACCCAATTGTGGTCCATTGGGTGTGGTCATCCAGTGGTTGGCTCAGCCCAAGTTCCAGTGACTTGTTCCTAGGCTCAGGTGCCATTGATTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAGTTGCCGGGCTTTGGGGGTCCATCATTGAAGGCCCACGAGTCGGCCGCTTTGACGCTTTCGGCAAGCCTGTGCCTCTAAAAGGCCACAATGCAACACTTGTTGTGCTTGGGACGTTCTTGTTGTGGTTTGGTTGGTTTGGGTTTAATCCAGGCTCGTTTGACAAGATTGTTGTGGCCTATCCCGACACGTCGGCCGAAGGTAATTGGACCTCGGTGGGTCGAACTGCCGTGGTGACCACATTAGCTGGCTCGACTGCCGGGGTAGTCACCTTATTCGGTCGACGGTTATTAGTCGGCCACTGGGATGCAATGGATGTGTGCAATGGCTTGCTTGGTGGGTTTGTTGCCATCACTTCTGGATGCTCAGTTGTTGAGCCATGGGCTGCCATTCTTTGTGGGTTTGTCTCGGCCTGGGTGCTAATTGGGCTCAACATTGTGGCACTAAAAATGAACTATGATGATCCATTAGAGGCGGCCCAATTGCATGGGGGGTGTGGCATTTGGGGTTTGTTGTTTACTGGGTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGTCTATAATTCAGGTGAGACAAGGGTGACAAGGCCCTATGGTCTGCTACTTGGAGGTGGATGGGGATTGATTGGAGCCCAAGCGATTGAGATTTTGGCCATCTTTGGATGGGTAAGTGTAACAATGGGCCCTATATTCTATGCCTTGCACAAGCTTGAGATATTGAGAATACCTGTAGAAGAGGAAATTGCTGGCCTTGATATCTCGAGCCATGGAGGGCATGCTTATGCTCAAGAAGATAATCATCGAAGATCTGATGGAGATTATATGTCTATTCCTCATTGCCCATCATAG 1386 0.4784 MEVSSWEQSVTYSINVIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNTMLTNVVDAVVGSISFYLFGFAFAYGSSNPFIGTDLFALAHIPNGTYDYAFFLYQWAFAIAVSGITSGSIAERTQFSAYLVFSFFLSGFVYPIVVHWVWSSSGWLSPSSSDLFLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRVGRFDAFGKPVPLKGHNATLVVLGTFLLWFGWFGFNPGSFDKIVVAYPDTSAEGNWTSVGRTAVVTTLAGSTAGVVTLFGRRLLVGHWDAMDVCNGLLGGFVAITSGCSVVEPWAAILCGFVSAWVLIGLNIVALKMNYDDPLEAAQLHGGCGIWGLLFTGLFAKEEFVIQVYNSGETRVTRPYGLLLGGGWGLIGAQAIEILAIFGWVSVTMGPIFYALHKLEILRIPVEEEIAGLDISSHGGHAYAQEDNHRRSDGDYMSIPHCPS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1196 461 Gene3D Ammonium transporter AmtB like domains 2 456 IPR029020 -
Ssu9g1196 461 TIGRFAM amt: ammonium transporter 15 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Ssu9g1196 461 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 4 456 - -
Ssu9g1196 461 SUPERFAMILY Ammonium transporter 12 421 - -
Ssu9g1196 461 Pfam Ammonium Transporter Family 18 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Ssu9g1196 461 ProSitePatterns Ammonium transporters signature. 168 193 IPR018047 GO:0008519|GO:0016020|GO:0072488
Ssu9g1196 461 PANTHER AMMONIUM TRANSPORTER 4 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1196 Ssu-Chr9 44574873 44576258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1196 2 445 Inorganic Solute Cotransporters AT1G64780 64.745 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1196 K03320 - pvy:116129597 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1196 9 44574873 44576258 Ssu9g1196 9 44574873 44576258 ECH