Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1131 ATGGGTTTCTCTGTTTTCCACCTTATCTCATTGTTGATTCTTTGGTCTTTCTTGCAACAATCCTCCTATGCCATCAAAAGGTCTTATATTGTATACTTAGGATCACATTCTCATGGCCCAAACCCTTCAGCAAGTGATCTTGAGTTTGCAACAAATTCCCATTACAAATTATTAGGCTCACACTTGGGAAGcCATGAGAAGGCCAAAGAagctatattttattcatataataaacaCATCAATGGCTTTGCTGCTATACTTGAAGAGGAAGATGCACTAGAGATAGCAAAAAATCCAAATGTGGTGTCTCTGTTTCTGAACAAAGGGCACGAATTGCAAACCACTAGATCATGGGGATTTCTTGGGCTAGAGAGTGATGGAATAGTTCCCAAAGACTCCATATGGGAGAAGGCAAGATATGGTGAGGGTGTAATCATTGCTAGCATTGATACAGGTGTTTGGCCTGAATCTAAAAGTTTTAGTGATGAGGGAATGACCCCTGTCCCATCAAGATGGCGCGGGATCTGCCAACTTGACAATTTTACCTGCAACAGTTCTATAGATGCTAAAGCTGCTAATGCAACAATTGAAGATGCTAAACTATGTAAGGTTGGAACTCTTGATCCTAAGAAGGCAAAGGGAAAAATCCTGGTTTGCCTCCTAAAGGAGTTTGATGGATTACTTTACGCGGAGGAGGAAGCTCTTTCTACAGGCACAGTAGGACTAATTTTGGCAAATAATAAGCAACTTGGTAATGACATTATGCCATTTGCTCATTTGCTGCCTACTTCACACATCAATTACACAGATGGTGAATATGTATATTCCTACATTGAAGGCACCAAGATCCCCATGGCTTACATGACCAGAGCAAAAACTCTACTAGGAGTAAAACCAGCTCCAGTAATTGCTTCATTCTCATCTAGGGGACCTAACCCCATCCAGCCAACAATCCTCAAGccTGACATCACTGCACCAGGTGTGGACATTCTTTGTGCAGGGTCAGAAGCTGTTAGTCCAACCGGTCTTGCATCAGATAATCGCCGGATTCCATATAATATAGGGTCAGGAACTTCTGAATCCTGCCCTCATGTTTCTGGCATCATTGGCCTTCTCAAAAGACTCTATCCCAATTGGAGTCCTGCAGCCTTAAAATCTGCCATCATGACTACTGCAATGACACTAGATAACAACAATAGACCAATTTTGGATCAATCTAAAGAAGAAGCAACCCCATTTGCTTATGGTGTGGGGCACATTCAACCAGAACTTGCAATGGACCCTGGACTTGTGTACGATCTAAACACTGTTGATTACTTGAACTTCCTATGTGGTCATGGTTACAACCTGACACAAATTAGGATGTTTTCTAGAGTGCCCCACATTTGTCCAAAATCTTACAACATGTATGATTTTAACTATCCTTCAATCACGGTGCCTAATCTCGGGAAACACTCTGTAGAAGTTACTCGTACAGTTACAAATGTGGGGTCACCAGGGACATATCAGGTGCATGTTAAGGCACCTATTGGGGTTTCAGTTTTGGTTGAGCCAAGATCCTTGACATTTAATGAAGTTGGTGAGAAGAAGAGATTCAAGGTCTTTTTGAAGGGCATAGAGGTAAGCAAAGCTGCTTCAGGTTATGTGTTTGGAGGGTTGTGGTGGTCAGATGGCAAGCACAAAGTTAAGAGTCCTCTTGTAGTGAAGCATAACTAG 1716 0.4155 MGFSVFHLISLLILWSFLQQSSYAIKRSYIVYLGSHSHGPNPSASDLEFATNSHYKLLGSHLGSHEKAKEAIFYSYNKHINGFAAILEEEDALEIAKNPNVVSLFLNKGHELQTTRSWGFLGLESDGIVPKDSIWEKARYGEGVIIASIDTGVWPESKSFSDEGMTPVPSRWRGICQLDNFTCNSSIDAKAANATIEDAKLCKVGTLDPKKAKGKILVCLLKEFDGLLYAEEEALSTGTVGLILANNKQLGNDIMPFAHLLPTSHINYTDGEYVYSYIEGTKIPMAYMTRAKTLLGVKPAPVIASFSSRGPNPIQPTILKPDITAPGVDILCAGSEAVSPTGLASDNRRIPYNIGSGTSESCPHVSGIIGLLKRLYPNWSPAALKSAIMTTAMTLDNNNRPILDQSKEEATPFAYGVGHIQPELAMDPGLVYDLNTVDYLNFLCGHGYNLTQIRMFSRVPHICPKSYNMYDFNYPSITVPNLGKHSVEVTRTVTNVGSPGTYQVHVKAPIGVSVLVEPRSLTFNEVGEKKRFKVFLKGIEVSKAASGYVFGGLWWSDGKHKVKSPLVVKHN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1131 571 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 185 IPR045051 -
Ssu9g1131 571 Pfam Subtilase family 299 418 IPR000209 GO:0006508|GO:0008236
Ssu9g1131 571 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 21 185 - -
Ssu9g1131 571 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 185 569 - -
Ssu9g1131 571 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 185 569 IPR045051 -
Ssu9g1131 571 ProSitePatterns Serine proteases, subtilase family, serine active site. 357 367 IPR023828 -
Ssu9g1131 571 Pfam Peptidase inhibitor I9 28 108 IPR010259 -
Ssu9g1131 571 Gene3D Peptidase S8/S53 domain 143 186 IPR036852 GO:0004252|GO:0006508
Ssu9g1131 571 Gene3D Peptidase S8/S53 domain 296 439 IPR036852 GO:0004252|GO:0006508
Ssu9g1131 571 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Ssu9g1131 571 PRINTS Subtilisin serine protease family (S8) signature 356 372 IPR015500 -
Ssu9g1131 571 Gene3D - 443 570 - -
Ssu9g1131 571 SUPERFAMILY Subtilisin-like 131 427 IPR036852 GO:0004252|GO:0006508
Ssu9g1131 571 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 113 IPR037045 -
Ssu9g1131 571 SUPERFAMILY Subtilisin-like 9 184 IPR036852 GO:0004252|GO:0006508
Ssu9g1131 571 Gene3D - 188 295 - -
Ssu9g1131 571 Pfam Fibronectin type-III domain 471 568 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1131 Ssu-Chr9 43087871 43094568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1131 185 569 Subtilisin-like Serine Gene Family AT5G59810 53.886 4.50e-136 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1131 - - zju:107417617 626.32