Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1123 ATGCGTTCCCTcccacccccacccccacccccaccTACACCTACACCCCTACCCACAAGCCAAACCAAACAAGTCTCTCCTGACCAAATTGTCATATCAAACCAAACCATCAAACAACATTCTCAAGAATCAGATGCACCGAATTATGTTACAACAAAGTCAATTAGGCCACCACCACCAAAACTAAGGCAACTTCCATTTCAAAGGACTAATCCAACCATATGGTTTGCGGCAGTGTTGTGCCTCATATTCAGCCTTGTTCTCATCTTCTTTGGAGTTGCAACTTTGATCATCTTCCTAGGCATCAAACCAAGAAACCCCACTTTTGACATCCCCAATGCAAACCTCAATGCAGTGTACTTTGACTCACCAGAATGCTTCAATGGTGACCTCACCCTCCTTGCAAACATCACCAACCCCAACAAGAAAATTGATGTGAGGTTTGAGTCCTTGGATGTTGAGCTTTTCTTCTCAGACAGGATCATATCAACACAGTCAATTCAGCCCTTTACTCAGAGGAGAAGGGAGAGCAGGTTGGAGTCATTGCACTTCATATCCAGCTTGGTGTTTTTGCCTAGGGATCTAGGTGTGAACCTTAAAAGACAGGTGCAGGGTAACAGGGTTAAATACAATGTAAGAGGAACATTTAAAGTGAGAGTAACTATGGGGCTCTTCCATTTGTCTTACTGGTTGCATAGCAGATGCCAGATAGAGATGACTGGTCCACCAAATGGTGTCCTGGTTGCTAGGAACTGCATCACAAAGAGATGA 771 0.4228 MRSLPPPPPPPPTPTPLPTSQTKQVSPDQIVISNQTIKQHSQESDAPNYVTTKSIRPPPPKLRQLPFQRTNPTIWFAAVLCLIFSLVLIFFGVATLIIFLGIKPRNPTFDIPNANLNAVYFDSPECFNGDLTLLANITNPNKKIDVRFESLDVELFFSDRIISTQSIQPFTQRRRESRLESLHFISSLVFLPRDLGVNLKRQVQGNRVKYNVRGTFKVRVTMGLFHLSYWLHSRCQIEMTGPPNGVLVARNCITKR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1123 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 38 256 - -
Ssu9g1123 256 MobiDBLite consensus disorder prediction 1 62 - -
Ssu9g1123 256 MobiDBLite consensus disorder prediction 19 51 - -
Ssu9g1123 256 Pfam Late embryogenesis abundant protein 136 234 IPR004864 -
Ssu9g1123 256 MobiDBLite consensus disorder prediction 1 18 - -
Ssu9g1123 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 38 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1123 Ssu-Chr9 42990209 42990979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1123 - - gmx:100803431 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1123 9 42990209 42990979 Ssu6g3610 6 79776503 79777192 PCT