Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1121 ATGAGAATCGGTCAGAAGAACCGTGCCGTGGGTGCCACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGTGTTTTGACTGTTCATGTTCGAGGAAGGGAGTTAGTTTCCAACTCCGTTCTTAGAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCGGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAATAGATCACTTTCTGCACTTGGGGATGTTATCTCTGCCTTGGCACAGAAGAGTCCACATATCCCTTATAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGgTGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTACTGGGGAGACAATTAGCACGCTCAAGTTTGCTGAGAGGGTTTCGTCCATTGAACTTGGCGCTGCTCAATCCAATAAAGAAACTGGTGAAATCCGAGAACTAAAGGAAGAGATATCAAGTCTTAAATTGGCACTGGAGAGGAAGGAAGCAGAATTGGAGCAGTGGAAGGCTGGGAATGCTCGAAATGCCATTGATTCTCAGAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGTACTAGTGGCAGCATGAAGCATGAAACTGGTCAAAGACTCGTGGATGATAGAAGCTTGGAGTCTAGAAGTTGCTCTTCGGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTTATGGACAAGGAATCCATGCCAAAAATGTCTCTTCTGAGTGAGGAAAAGTTAGTGAGCTCAGGGAAGGGAAGATCACCATCCCCTCCAGTGAGAAGATCACTGTCCAATGATAGAGGGACAGTCATTAAAAGCAAGGTCAAAACTGAAACATCAGACAACCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCTGCTAACAAATCCCTTGTCACAATGCCAGTGGCTGCATCCACTGACAATAACACAAGGGTGTATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAACATTTCCGAAACACTCTTCAACCTCCAGAAGGCCAGCTCCAGGAAAGTACATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCAGTAAGACAAGGTGGTATTAGAAAAATCAAGGTTGAGAGTAAGTCTAAGGCCAAACATCATCAACTATCACCCTTTAAGATTCAAAAGCCTGATTTGATCCCAACATTTATTCCTGACATGGAATTTGCTGGTGAAATGACTGTGGAGACACCTCCAAAGAATGATTACTCGGAGGCCGAAAATGATCTTAGATTTATGGAGTCTGCTGTCCATGGTGCTTTAAGTCTCAAAAAAATACGTCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTACAAACAGGAGAGTCTTTATTGGTTAGCAAAGTTGAAAATAAACTTTTGAATGGTTCAGGTAACAATCTTAAAGCAGGAAGCAATGCATCAATGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGTTTTTGGGTTTATCTTGA 1560 0.4218 MRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSVLRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNATGETISTLKFAERVSSIELGAAQSNKETGEIRELKEEISSLKLALERKEAELEQWKAGNARNAIDSQKPRAVSPFQLPKYGTSGSMKHETGQRLVDDRSLESRSCSSGKQRRSRFPSAFMDKESMPKMSLLSEEKLVSSGKGRSPSPPVRRSLSNDRGTVIKSKVKTETSDNQPILKHPFPARVPANKSLVTMPVAASTDNNTRVYVNSQEPVKQENISETLFNLQKASSRKVHQEHEEEQFKQALSAVRQGGIRKIKVESKSKAKHHQLSPFKIQKPDLIPTFIPDMEFAGEMTVETPPKNDYSEAENDLRFMESAVHGALSLKKIRQNFARNFQNLESRGIVQTGESLLVSKVENKLLNGSGNNLKAGSNASMPEFRRSRSTPRGKFLGLS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1121 519 MobiDBLite consensus disorder prediction 216 234 - -
Ssu9g1121 519 Gene3D Kinesin motor domain 1 185 IPR036961 -
Ssu9g1121 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 180 IPR027417 -
Ssu9g1121 519 SMART kinesin_4 1 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1121 519 MobiDBLite consensus disorder prediction 274 300 - -
Ssu9g1121 519 MobiDBLite consensus disorder prediction 490 519 - -
Ssu9g1121 519 Coils Coil 150 184 - -
Ssu9g1121 519 MobiDBLite consensus disorder prediction 490 505 - -
Ssu9g1121 519 ProSiteProfiles Kinesin motor domain profile. 1 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1121 519 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 1 514 - -
Ssu9g1121 519 MobiDBLite consensus disorder prediction 187 306 - -
Ssu9g1121 519 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 514 - -
Ssu9g1121 519 Pfam Kinesin motor domain 1 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1121 519 PRINTS Kinesin heavy chain signature 13 30 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1121 519 PRINTS Kinesin heavy chain signature 93 114 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1121 519 PRINTS Kinesin heavy chain signature 44 62 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1121 Ssu-Chr9 42905829 42908091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1121 4 143 Calmodulin-binding Proteins AT5G65930 55.000 3.64e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1121 K10406 - gmx:100793458 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1121 9 42905829 42908091 Ssu9g1121 9 42905829 42908091 ECH
Ssu9g1121 9 42905829 42908091 Ssu6g3607 6 79733410 79739564 PCT