Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g1112 | atgATAACAAGCACAACATTCACTTTGGCCATTTCAAAGAGTGAGAAGCCTATTTGGCCTATGAGGGTGTGGATAGCAGGTTATGATATTGGCTGTGTCCTTAATCTGCTGCTACTTTGTGGCCGCTACCATCAACGTCATGTGACTCATGGGAATGCTCTTAGCCTTTCTGATTTGGAGCAGCAGAGAAACAATGGAGAAACAAGGAACTCACATTTGATGGACAAATGCCGTAGTTCACTAGAGCTTTTCTTTGCCATATGGTTCGTGATGGGCAATGTTTGGGCCTTTGACTCACGTTTTGGATCTTTCCAACAAGCTCCAAAACTCCAAGTGCTCTGCATCATCCTGCTTGCTTGGAATGCAATATGCTACTCTTTCCCTTTCCTCTTGTTTTTGCTATTGTGTTGTTGTGTCCCACTAATGAGCACCCTCCTTGGATACAACATGAGCATGGGCTCCTCTGCTAGGGGGGCATCTGATGATCAAATCTCACAACTCCCAAGTTGGAGATATAAAGGGGTTCGCACCAACTTAGACATTGGCAATGACTCTCAAAGCAGTGAAAGATTGATCAATGAAGATCCAGAATGTTGCATTTGTTTGGCCAAGTACAAAGACAAGGAAGAAGTTAGGCAATTACCATGCTCCCATTTGTTCCACCTAAAATGTGTGGATCAATGGCTAAGAATTATATCATGCTGCCCCCTTTGTAAACAAGGATTACATAGGTAG | 735 | 0.4327 | MITSTTFTLAISKSEKPIWPMRVWIAGYDIGCVLNLLLLCGRYHQRHVTHGNALSLSDLEQQRNNGETRNSHLMDKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQVLCIILLAWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASDDQISQLPSWRYKGVRTNLDIGNDSQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHLKCVDQWLRIISCCPLCKQGLHR | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g1112 | 244 | SUPERFAMILY | RING/U-box | 189 | 242 | - | - | |
Ssu9g1112 | 244 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 148 | 243 | IPR013083 | - | |
Ssu9g1112 | 244 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 2 | 243 | - | - | |
Ssu9g1112 | 244 | Coils | Coil | 56 | 76 | - | - | |
Ssu9g1112 | 244 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 2 | 243 | - | - | |
Ssu9g1112 | 244 | Pfam | RING-like zinc finger | 197 | 225 | IPR001841 | - | |
Ssu9g1112 | 244 | ProSiteProfiles | Zinc finger RING-type profile. | 198 | 239 | IPR001841 | - | |
Ssu9g1112 | 244 | CDD | RING-H2_RNF111_like | 196 | 239 | - | - | |
Ssu9g1112 | 244 | SMART | ring_2 | 198 | 238 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g1112 | Ssu-Chr9 | 42776515 | 42779481 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g1112 | 2 | 242 | C3H Transcription Factor Family | AT4G26580 | 69.959 | 1.51e-116 | 335 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g1112 | - | - | gmx:100818715 | 464.922 |