Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1063 ATGGCTGTGAACAATCGCTGTTTTGTGGAATGGAAAGAGCAGTTCGTTTCACAGGAGCGTGGTAATCGTGTGGTTCACTATTACCTGAAGGATGCTGCTGGGGAATCCATCCTTGCAGTGGTGGGCACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAGTTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTTGTGGATTGGCTGACATCAACGCTATCAAACCAGAACCTGCAGGGAGATAGAAGTGTATCGTCTGGTCATAACTTGGTACAAGCTCATGAGACCACAAATGACAGTGTCAACAAAATTACTGGTCTGTCTGCACAAATAACAGATGACAAGGACTTTCCAATGGGTAACTCCAAATTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAGCTTAAGCATTATCCTGCTTTTTTCAGGAATGGCATCAAAATAGCGATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAATCATTATGTTGCTTATGTAGAGGATATGTATGAGGACAGGAGGGGACAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCCGTACGAAATCCTCACCCTCGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGCGTAGATGGTCCTGCCACAGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTTCTTTTCCCCCACTTCAACAGACAGAATACATTTGTGTTTTAGGCAATTTAGAAGCAACAAAGTCAAGCCCTTTGACTTGAGTAAACTTCGTGGCTACCATGCTCAACCAATTCTTTCTTGCTTGCACCTTGATTCAATACAGAACCCTGAGAGCCTTGCAAGAGAAGATGAAGAGTTGAGTGCAGGTGACGATGTGAAGGTAGGAGCTAAGAGGAGCAGAAGTGATAAGGGGTCTCCTCGGTCTTGGATAAGTCGCCAGGGAGTTAGGAAGTTAATTAGAAGTAAGCAAGTGATGGTATACAAAACCTTCCAGGTTGCAAAGTATGCAAGGCCAGATAGAAGATTGCTTTCTCTAAAGCAGGTTGAGTGTCAACCTTGGTCTAGCCACACATACAAGATTGATGACAAGATAGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAACAGTTGAAAGTCCAATACGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATACCTGCTTTCAAGTTGGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCTCCAGCTTATGAGGAGCAAGAACTGGCTGTTGAGGTTGGAAGTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGAGTTGTAACTAGAATTGACAACTGTGGTGATGACAGTGTTCAAGTCTACTTTCCTGGTGAATGCTTGCTGATGAAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGAGACAGTTGGATTAACATTAAGGCAAAACCTGAAATAACTACAACTATATTCACAGCTAATAATAGCTTTAACACCAAGCTTTCCTTGTCCCCATCTATCGGTAAAGATGCGGACTCTCTTGGTTTTGCTAATTCATGTCATGGTGATCCTGTTGGTATAAAGTCTAATGAACCTGccatcaaagaagaaaaaattgtgtGTTGTGATGGCTTTGCTGAAGATGGGGACAGTGTCCAGGATAATAAACCCTCTTCAGAAAAAAGTACTCAAGCTGATAATATTGAGATACATGGCAGTTGTGATAATGAAGATAATGGTGATGATAACGATAACGATAATagcaatgatgatggtggtaaCAAGAGTGGTGATGATGATAATGGAAATAAAGATATGGAGGTATTTGGAACTTCTGAACCAGACTCTGAAAAACTAGAGTTTGCGGAAGTGGCtgtataa 2058 0.4223 MAVNNRCFVEWKEQFVSQERGNRVVHYYLKDAAGESILAVVGTERSVRHMCYVVAEEFLEVCGKEGSIPTGFKWRSRREVVDWLTSTLSNQNLQGDRSVSSGHNLVQAHETTNDSVNKITGLSAQITDDKDFPMGNSKLSNSDIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMGKGENHYVAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISAECVDGPATVLTREHYEKCMPFFSPTSTDRIHLCFRQFRSNKVKPFDLSKLRGYHAQPILSCLHLDSIQNPESLAREDEELSAGDDVKVGAKRSRSDKGSPRSWISRQGVRKLIRSKQVMVYKTFQVAKYARPDRRLLSLKQVECQPWSSHTYKIDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRHSGRPTIRPAPAYEEQELAVEVGSAVDAWWSDGWWEGVVTRIDNCGDDSVQVYFPGECLLMKVCKKDLRISRDWLGDSWINIKAKPEITTTIFTANNSFNTKLSLSPSIGKDADSLGFANSCHGDPVGIKSNEPAIKEEKIVCCDGFAEDGDSVQDNKPSSEKSTQADNIEIHGSCDNEDNGDDNDNDNSNDDGGNKSGDDDNGNKDMEVFGTSEPDSEKLEFAEVAV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1063 685 MobiDBLite consensus disorder prediction 647 685 - -
Ssu9g1063 685 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Ssu9g1063 685 MobiDBLite consensus disorder prediction 609 685 - -
Ssu9g1063 685 PANTHER OS07G0607300 PROTEIN 4 653 - -
Ssu9g1063 685 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 653 - -
Ssu9g1063 685 Pfam BAH domain 171 260 IPR001025 GO:0003682
Ssu9g1063 685 Gene3D - 136 295 IPR043151 -
Ssu9g1063 685 SMART agenet_At_2 389 454 IPR014002 -
Ssu9g1063 685 SMART agenet_At_2 475 533 IPR014002 -
Ssu9g1063 685 MobiDBLite consensus disorder prediction 312 341 - -
Ssu9g1063 685 SMART BAH_4 168 287 IPR001025 GO:0003682
Ssu9g1063 685 Pfam Agenet domain 394 468 IPR008395 -
Ssu9g1063 685 MobiDBLite consensus disorder prediction 312 338 - -
Ssu9g1063 685 MobiDBLite consensus disorder prediction 615 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1063 Ssu-Chr9 41884226 41889750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1063 403 531 PHD Transcription Factor Family AT5G58610 30.075 1.05e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1063 - - gmx:100809407 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1063 9 41884226 41889750 Ssu9g1063 9 41884226 41889750 ECH