Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1055 ATGATTTTGAAGGATATCTTTGGAGGTGGAAGTGATACATCATCTGCAACCATAACATGGGCAATGACAGAAATGATGAAAAATCCAAGAATAATGGAAAAGGTACAAGCTGAGGTAAGAGAGGTATTTGATAAAGAAGGAAAGCCTAATGGAAGTGGCATAGAGaatctaaaatatttgaaatctgTTGTGAATGAGACATTAAGATTACACCCTCCTGGTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCTTGTGAGATCAATGGGTATTATATACCTGTGAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACCTATGGACTGAGGCTGAGAGATTTTATCCTGAGAGATTCATTCAAAGTTCTGTTGACTACAAAGGCAATAATTTTGAGTTCATCCCATTTGGTGCTGGAAGAAGAATGTGCCCCGGCATCACATTTGGCTTGAGCAACGTTGAGTATGCACTTGCAATGTTAATGTATCATTTTGATTGGAAACTTCCCAAcgaaatgaaaaatgaagatttGGACATGACTGAGATATTTGGAATAACAGTTATTCGAAAAGATGATTTGTATCTCATTCCCAAACTTTTCATACTTTGCCCACTCCATAAGCTCTACACATGA 648 0.3627 MILKDIFGGGSDTSSATITWAMTEMMKNPRIMEKVQAEVREVFDKEGKPNGSGIENLKYLKSVVNETLRLHPPGPLLLPRECGQACEINGYYIPVKSKVIVNAWAIGRDPNLWTEAERFYPERFIQSSVDYKGNNFEFIPFGAGRRMCPGITFGLSNVEYALAMLMYHFDWKLPNEMKNEDLDMTEIFGITVIRKDDLYLIPKLFILCPLHKLYT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1055 215 PRINTS P450 superfamily signature 9 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS P450 superfamily signature 62 73 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS P450 superfamily signature 139 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 Gene3D Cytochrome P450 1 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 SUPERFAMILY Cytochrome P450 3 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS E-class P450 group I signature 148 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS E-class P450 group I signature 102 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS E-class P450 group I signature 18 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS E-class P450 group I signature 138 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PRINTS E-class P450 group I signature 61 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 141 150 IPR017972 GO:0005506|GO:0016705
Ssu9g1055 215 Pfam Cytochrome P450 4 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1055 215 PANTHER CYTOCHROME P450 71B11-RELATED 2 205 - -
Ssu9g1055 215 PANTHER CYTOCHROME P450 71D9 2 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1055 Ssu-Chr9 41734332 41734979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1055 2 206 Cytochrome P450 AT3G26330 51.707 4.78e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1055 - K13267 gmx:100814284 363.614