Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1053 ATGGATCTTCAGATCCTCTATTTTGCatcctttttctcctttttcatttttatgtttatggTACACAAAATAGTGACCAAAAAATTTGACTCAACTCCAAATTTACCGCCAGGGCCATGGAAGTTACCTGTTATAGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCACCGGCTAAGAGATTTATCAGCAAAATATGGACCCTTGATGCATTTGAAGCTTGGAGAGGTTTCTACCATTGTGGTTTCATCCCCGGAGTATGCTAAGGAGGTGTTGAAAACCCATGATCTTATCTTTGCATCAAGGCCTCATGTTCTAGCCTCAAAGATAATGAGTTATGATTCTCTAGATATAGCTTTTGCACCTTATGGTGATCACTGGAGACAGCTAAGGAAGATTTGTGCGTTGGAGCTACTAAGCTCAAAACGTGTCCAATCTTTCCAACCAATCAGAGAAGAAGTGCTCACTAATTTCATCAAACGGATTGCTACAAAAGAAGGATCTCCTGTTAACCTTACCAACGAGGTGAtttcaacaatatttacaaTCACCTCAAGAACTGCCCTTGGCAACAAGTGCAGGCACCATCAAAAGTTAATATCAGTGGTAAAGGAAACCACAGAGGCTGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCTAAATGGCTTCAACACATCTCTGGGTTGAAGCCTAAGCTTGAGAAGTTGCATCAACAAGCTGACCAGATAATGAAAAACATCATCAATGAGCATAGAGAGGCCAAGTCAAGCGCCACAGAGGACCAGGAAGAAGGCGAAGTTCTTTTGGATGTGCTCTTGAAGCATCTGTTTTGCTTAAGTGATGATAGTGTCAAGGCTGTGATCTGGGATATCTTTGGGGGTGGAAGTGATACATCATCTGCTACCATAACATGGGCAATGGCAGAGATGATAAAAGATCCAAGAGTAATGAAGAAGGTACAAGCTGAGGTAAGAGAGGTATTCAACAAAGAAGGAAAGCCCAATGAAAGTGGCATAGAGAAACTGAAATATTTGAAATCTATTGTAAAAGAGACATTAAGATTACACCCTCCTAGTCCTCTTCTGCTTCCAAGAGAGTGTGGACAAGCTTGTGAGATCAATGGGTATCATATACCTGTGAAAAGCAAGGTCATAGTTAATGCTTGGGCAATTGGAAGAGATCCAAAGCACTGGACTGAGGCAGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTTCTGCTGACTACATAGGCAATAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGGATATGCCCTGGCCTCACATTTGGCTTGATCACCGTTGAGTATGCACTTGCATTATTGATGTATCATTTTGATTGGAAACTTCCCAATGGAATGTACAATGAAGATTTGGACATGACTGAGATATTTGGAATAACAGTTAGCCGAAAAGATTTATACCTGATTCCCAGAACTTGTCATCCTTAG 1485 0.4027 MDLQILYFASFFSFFIFMFMVHKIVTKKFDSTPNLPPGPWKLPVIGNIHNLVGSLPHHRLRDLSAKYGPLMHLKLGEVSTIVVSSPEYAKEVLKTHDLIFASRPHVLASKIMSYDSLDIAFAPYGDHWRQLRKICALELLSSKRVQSFQPIREEVLTNFIKRIATKEGSPVNLTNEVISTIFTITSRTALGNKCRHHQKLISVVKETTEAAGGFDLGDLYPSAKWLQHISGLKPKLEKLHQQADQIMKNIINEHREAKSSATEDQEEGEVLLDVLLKHLFCLSDDSVKAVIWDIFGGGSDTSSATITWAMAEMIKDPRVMKKVQAEVREVFNKEGKPNESGIEKLKYLKSIVKETLRLHPPSPLLLPRECGQACEINGYHIPVKSKVIVNAWAIGRDPKHWTEAERFYPERFIESSADYIGNNFEFIPFGAGRRICPGLTFGLITVEYALALLMYHFDWKLPNGMYNEDLDMTEIFGITVSRKDLYLIPRTCHP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1053 494 Coils Coil 236 256 - -
Ssu9g1053 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Ssu9g1053 494 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 SUPERFAMILY Cytochrome P450 36 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 Gene3D Cytochrome P450 26 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1053 494 PANTHER CYTOCHROME P450 71D9 8 492 - -
Ssu9g1053 494 PANTHER CYTOCHROME P450 71B11-RELATED 8 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1053 Ssu-Chr9 41561197 41566119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1053 4 489 Cytochrome P450 AT3G26300 41.036 8.76e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1053 - K13267 gmx:100814284 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1053 9 41561197 41566119 Ssu9g1053 9 41561197 41566119 ECH