Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1049 ATGGACTAtgtcaaaaatggtgaaaaatccAAAGGTGATGAAAAAGCACAAGCTGGGGTGAGAAGGGTGTATAATAGCAAAGGGCATCTGGATGAGACTGACTTGGaccaattgatatatttaaaatgtgtcATCAAAGAAACAATGAGGCTACACCCACCTGCACCATTGTTGCTTCCTAGAGAAAGCAAGGAAAGATGTGAAATCAATGGATATGACATACCTGCTAGGACCAGGGTCCTCATCAATGCTTGGGCTATTGGAAGAAATCCCAAGTATTGGACTGAGGCTAAGACATTTAAGCCAGAGAGATTTTTGGAAAGCTCAATAGATTATAGAGGCACAAACTTTGAATTTATCCCATTTGGTGCTGGAAGGAGAATGTGTCCAGGCATTGCATTTGCCATAGCTGACACTGAGTTGCCAGTTGCTGGGCTGCTTTACCATTTTGTTTGGAGGCTGCCTAATGGAATCAAACATAAAGAACTTGACATGAGTGTATCATATGGGTTTACAGCAAGAAGACAAAATGGACTATGCTTGATTCCTATTATTCATCACCCGCTAATAAATAGGTCACCTATTTAA 588 0.3827 MDYVKNGEKSKGDEKAQAGVRRVYNSKGHLDETDLDQLIYLKCVIKETMRLHPPAPLLLPRESKERCEINGYDIPARTRVLINAWAIGRNPKYWTEAKTFKPERFLESSIDYRGTNFEFIPFGAGRRMCPGIAFAIADTELPVAGLLYHFVWRLPNGIKHKELDMSVSYGFTARRQNGLCLIPIIHHPLINRSPI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1049 195 SUPERFAMILY Cytochrome P450 14 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PANTHER CYTOCHROME P450 71B11-RELATED 13 186 - -
Ssu9g1049 195 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 122 131 IPR017972 GO:0005506|GO:0016705
Ssu9g1049 195 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS P450 superfamily signature 43 54 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 Pfam Cytochrome P450 14 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 Gene3D Cytochrome P450 13 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS E-class P450 group I signature 83 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PRINTS E-class P450 group I signature 42 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1049 195 PANTHER CYTOCHROME P450 71D10 13 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1049 Ssu-Chr9 41459468 41460055 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1049 14 187 Cytochrome P450 AT3G26230 50.568 1.09e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1049 - K23806 gmx:606548 260.766