Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g1039 | ATGGACGCCGGCGAGGCCCTCTCCGACGATCCGAATGGCCCCGGGTCGAGGCCAAATCCGCCTGCCGACGGAGCTCCGTCCGGCGGCGGCGCGCGGTACAAGCTCATGTCGCCGGCGAAGCTTCCGATCTCGCGCTCGCCGTACGTCACGATTCCGCCGGGGCTCAGTCCGACGTCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGATCCCTTACTATGCTTCATCAAACAGCATATGGTTCCCCAACTTCTGCTGCATCTGCTACATTTCCTGTAACCAGTGTATGCTTCAATACCAATACTGTTGATGACAGAAAACCCAGCTTCTTTGAGTTCAAACCACCCAGTAGATCAAATATGGTTCCTGCAGACTCTGACAACCATACTAGTGAAAAATCTACTCAAATAGACAGTCAAGGAAAAGCTCAAGCTTTTGATTCATCACCGTTAGTAAAAAATGAGATAGCAGTTCCTTTAAATGAATTAAGTCTATCATCACCAGTTCAAATGGTTAACTCAGGAGCTAGTGCCCGTGTTGAAGGTGATTTGGATGAATTGAACCCTAGGAGCAACATAGCAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTTCGGTTGCAGCTGAGAGAGTATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAACATGTGAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGCTCTTATGATGGGCAAATCACCGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCACACCGCCGTTACTCTGCTGGAACTATCATGTCTATGCAAGAAGAGAGATCTGATAAAGCTTCTTTGACTAGCCAAGATGACAAAGGTTCCAATATATGTGGCCAGGTGTCTCACCCAGCTGAGCCTGACAGTACTCCAGAGCTATCACCTGTAGCAACCAATGATGCTGATCTGGAGGGTATGAGGTTTTTGTCAAACCGGAATAATGATGAGCTTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGCTGACATCACTCCTGTAGTTAAGCCCATCCGGGAGCCACGGGTCGTTGTACAAACGCTGAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAACACCGGTTGCCCTGTTAGAAAACACGTGGAGAGAGCATCTCATGATCCAAAGGCTGTAATAACCACATATGAGGGTAAACACAATCATGATGTACCAACTGCAAGGAATAGTTGCCATGACATGGCAGGACAAGCAAGTGCAGGTGGACAGTCAAGAATTAGGCCAGAAGAAAGTGATACGATCAGCCTTGACCTTGGGATGGGAATTAGCCCAACTGCTGAAAACACATCAAACATTCAAGGGAGAATGATGCTTTCTGAATTTGGGGACAGTCAAACTCACACCAGCAATTCCAATTTTAAGTTTGTTCATACTACTTCGGCACCAGCATACTTTGGTGTTCTAAATAACAACTCTAATCCGTATGGTTCTAGAGAAAATCCCAGTGATAGTCCATCTTTAAACCATTCTGCTTATCCTTGCCCGCAGAACATGGGAAGAATACTAATGGGCCCTTGA | 1746 | 0.4599 | MDAGEALSDDPNGPGSRPNPPADGAPSGGGARYKLMSPAKLPISRSPYVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLTMLHQTAYGSPTSAASATFPVTSVCFNTNTVDDRKPSFFEFKPPSRSNMVPADSDNHTSEKSTQIDSQGKAQAFDSSPLVKNEIAVPLNELSLSSPVQMVNSGASARVEGDLDELNPRSNIATGLQASQVDNRGSGLSVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSYDGQITEIIYKGTHDHPKPQPHRRYSAGTIMSMQEERSDKASLTSQDDKGSNICGQVSHPAEPDSTPELSPVATNDADLEGMRFLSNRNNDELDDDDPFSKRRKMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSCHDMAGQASAGGQSRIRPEESDTISLDLGMGISPTAENTSNIQGRMMLSEFGDSQTHTSNSNFKFVHTTSAPAYFGVLNNNSNPYGSRENPSDSPSLNHSAYPCPQNMGRILMGP | 581 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g1039 | 581 | SUPERFAMILY | WRKY DNA-binding domain | 393 | 461 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | SUPERFAMILY | WRKY DNA-binding domain | 223 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 548 | 572 | - | - | |
Ssu9g1039 | 581 | ProSiteProfiles | WRKY domain profile. | 396 | 461 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | Gene3D | WRKY domain | 386 | 462 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | Gene3D | WRKY domain | 218 | 286 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 18 | 561 | IPR044810 | GO:0003700 | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 548 | 569 | - | - | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 116 | 157 | - | - | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 300 | 319 | - | - | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 300 | 336 | - | - | |
Ssu9g1039 | 581 | SMART | WRKY_cls | 226 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | SMART | WRKY_cls | 401 | 460 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | MobiDBLite | consensus disorder prediction | 130 | 156 | - | - | |
Ssu9g1039 | 581 | ProSiteProfiles | WRKY domain profile. | 221 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 18 | 561 | - | - | |
Ssu9g1039 | 581 | Pfam | WRKY DNA -binding domain | 402 | 458 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g1039 | 581 | Pfam | WRKY DNA -binding domain | 227 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g1039 | Ssu-Chr9 | 41248834 | 41254497 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g1039 | 36 | 581 | WRKY Transcription Factor Family | AT4G26640 | 56.679 | 0.0 | 541 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Ssu9g1039 | WRKY | 1.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g1039 | - | - | gmx:100781491 | 1053.89 |