Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g0981 | ATGATCAAGAAAGCCCGCGTATCAGTTCGAGCAAGATCAGCTTTTTCTATGATTTCAGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGGAATCCATGTCCGCGATCTTATTATCGTTGCTCAATGGGGACTGGTTGTCCAGTTCGGAAGCAAGTACAAAGATGTGCTGTAGATCCAAGTGTGTTGATCACAACATATGAATGGCAGCATAATCATATACTCCCTCCCACTGCCAAGGCAATGGCATCCACCACATCAGCTGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCCTTATACACCCAAACACATTAGAAAGTGCAGCACTTCCATTTTCACAGAACTTGGCAACCCTCTCAACTTTAGCTCCATTTCCAACTATCACTTTGGATCTCACTCAAAGTGCTACCAATAATTGTTCAGAGCTACTACAAGGGGCACCACAGGATAACCAACATTGCCTCCTTTCCCCACTTTTGGCTCAGAATTCTATGTCAGCTCCAAGCATTTTTGACCAAGCTAAGCTTTCTAGCTTACATGGGTCTCACGGAACAGAAAATACTTCATTTGTTGACAGGGTAAATGAAGCAACAGCTGCTATCACCGCAGACCCGAAGTTCAGTGCAGCTCTTGTGGCTGCCATAACGTCTATTATTGGAAGTTTACATCCAAACATTGATGGTACAAGTGGAGACCCAGCATTGCAATAA | 735 | 0.4435 | MIKKARVSVRARSAFSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGTGCPVRKQVQRCAVDPSVLITTYEWQHNHILPPTAKAMASTTSAAASMLLSGSMPSSDGLIHPNTLESAALPFSQNLATLSTLAPFPTITLDLTQSATNNCSELLQGAPQDNQHCLLSPLLAQNSMSAPSIFDQAKLSSLHGSHGTENTSFVDRVNEATAAITADPKFSAALVAAITSIIGSLHPNIDGTSGDPALQ | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g0981 | 244 | PANTHER | WRKY TRANSCRIPTION FACTOR 6-LIKE | 1 | 233 | - | - | |
Ssu9g0981 | 244 | Gene3D | WRKY domain | 3 | 80 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g0981 | 244 | SMART | WRKY_cls | 18 | 78 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g0981 | 244 | ProSiteProfiles | WRKY domain profile. | 13 | 79 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g0981 | 244 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 233 | IPR044810 | GO:0003700 | |
Ssu9g0981 | 244 | SUPERFAMILY | WRKY DNA-binding domain | 12 | 79 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu9g0981 | 244 | Pfam | WRKY DNA -binding domain | 20 | 76 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g0981 | Ssu-Chr9 | 39819705 | 39822344 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g0981 | 2 | 238 | WRKY Transcription Factor Family | AT1G62300 | 54.086 | 2.90e-72 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Ssu9g0981 | WRKY | 1.9e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g0981 | - | - | gmx:100779533 | 363.614 |