Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0976 ATGTCCAATTTGCCCCAATCACTGTCGATGGGCGCGGCCTTTGGCGGCGGCGGCGCTCCACCGCCAGCGTCTAGTGGCGCCGGAGCCCAGAGCTCCGGCGCCGGCAAGGATCGCAAGATGGCCTCGGCGGAGCAGCTCGTACTCGAACTCAGCAACCCTGAGCTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGAGAGCTATTTCAAGATCTAGCTCCGTTGTTATGGAATTCTTTTGGTACTATTGCTGCTCTTTTACAGgAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGtgTGTAGCATCTCACCCTGATACAAGGATGTTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGCTTCCTTCTTTCAACAGAGATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGCAGTGAACTATCCAAAACAGTTGCAACATTTATTGTTCAAAAGATTCTGTTGGACGATGTGGGCTTGGACTATATTTGTACTACAGCTGAGCGCTTTTTTGCGGTAGGTCGAGTTTTGGGAAACATGGTGGGCGCTCTTGCTGAGCAACCCTCATCTCGTCTATTGAAGCACATCATTCGGTGTTATCTTCGCCTCTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTGCCCGACATGTTAAGAGATGCTACTTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCATATGATTGTGACCTGA 975 0.4728 MSNLPQSLSMGAAFGGGGAPPPASSGAGAQSSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVGALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0976 324 PANTHER UNCHARACTERIZED 1 322 - -
Ssu9g0976 324 Pfam Cell differentiation family, Rcd1-like 46 304 - -
Ssu9g0976 324 Gene3D - 35 305 IPR011989 -
Ssu9g0976 324 PANTHER BNAA05G20110D PROTEIN 1 322 - -
Ssu9g0976 324 MobiDBLite consensus disorder prediction 1 37 - -
Ssu9g0976 324 SUPERFAMILY ARM repeat 48 279 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0976 Ssu-Chr9 39672028 39685470 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Ssu9g0976 Rcd1 9.3e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0976 K12606 - gmx:100784529 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0976 9 39672028 39685470 Ssu6g3492 6 77824855 77830379 PCT