Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0968 ATGGTAAGTGAAAGATTGAAGCGCACTGTCATCTCTCTGGTGGGAATAGGTGGACAAGGAAAAACAACTCTTGCCAAGAAAGTTTTTGACAACAAGAAGGTGGTCGAGGACTTCAAATGCCATGCATGGATCACAGTGTCTCAGTCCTACACAGTAGAACGATTGTTGAGGGACATGCTGCGGGAGTTgtgcaaagaaaaaaaggagagtCCTCCTCTCAGTGTTTCTACAATGGATCGAGCATCGCTGAGAGATGAAGTCAGAAACCGCTTGCGCGACGAGAGGTACGTCGTCGTGTTCGATGACGTGTGGAATGAAAGTTTTTGGGACGAAATGGAATTTgctttaatagataaaaaaagaggAAGTAAGATATTTATCACAACCAGGAAAAAGGAAGTTGCTATGCGTTGTATGAGATCTGCTTTTGTTCAGGTGCATGAGTTGCAGCCTTTAACTCCTGACAAATCTTTCGAATTGTTTTGCAAAAAGGCATTTGGATCTGACTTGGATGGACATTGTCCAAACAATCTCAAGAACATATCTACTGAAATTGTTGAAAGGTGTGAAGGTTTACCACTAGCAACTGTGGCCATTGGTGGCCTTCTATCTTGCAAAGATAGAGATGCAGGTGTATGGCAAAGATTTAGTAAAAATCTAATCTAG 666 0.3979 MVSERLKRTVISLVGIGGQGKTTLAKKVFDNKKVVEDFKCHAWITVSQSYTVERLLRDMLRELCKEKKESPPLSVSTMDRASLRDEVRNRLRDERYVVVFDDVWNESFWDEMEFALIDKKRGSKIFITTRKKEVAMRCMRSAFVQVHELQPLTPDKSFELFCKKAFGSDLDGHCPNNLKNISTEIVERCEGLPLATVAIGGLLSCKDRDAGVWQRFSKNLI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0968 221 PANTHER - 5 213 - -
Ssu9g0968 221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 220 IPR027417 -
Ssu9g0968 221 PANTHER DISEASE RESISTANCE PROTEIN RP 5 213 IPR044974 GO:0006952
Ssu9g0968 221 Gene3D - 2 145 IPR027417 -
Ssu9g0968 221 Pfam NB-ARC domain 4 220 IPR002182 GO:0043531
Ssu9g0968 221 PRINTS Disease resistance protein signature 10 25 - -
Ssu9g0968 221 PRINTS Disease resistance protein signature 90 104 - -
Ssu9g0968 221 PRINTS Disease resistance protein signature 189 203 - -
Ssu9g0968 221 Gene3D - 152 221 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0968 Ssu-Chr9 39565583 39566248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0968 11 208 WRKY Transcription Factor Family AT5G45050 29.557 4.95e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0968 K13457 - gmx:102667903 282.722