Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0965 ATGGAGAAAGTGCAGGAAATTGCAGTTGATCAGTTGCTTCCACTCTTAAAGAAAGTAGTGAGCGCAGTGAAGGAGGTCCCAACAGATGTTGCAGGCATGAAAGGCAAACTTGATGGGGTTCAAGCCAACATTCATGACGCAGACAGAATGGCAGCAGCTGAAGAAGGCAACTCAGGTGAAGGAGTCAAAGCAAAGGTGAAGCAGCTGGTAGAAACATCTTTTCGCATGGAAGACATCATCGATGAATACGCAATCCGTGAGGAAAGGCACCTTCGCGGTGATGATCCTGGACGTGCAGCTTTGCCTTACAAGACTGTGGACTTCGTCAAAGCCATGACCTCGCGTCTTCAGTTTGCTTACATGAACGAGGATGTTAAATCGGAGTATGGTGCAATCAAGGACAGGAATAAAAGCGAGGATGGCTCCCAAACGCCCTTTTCTGGCGGAAACCAAGACGCCGCGTTCCGTAACCTTCGAGAGGCTCCTTTATACGTCGAGGAAGGCGACGTTGTGGGCTTTGAAGGCCCGCTAGATGAATTGATTGGTTGGATGGTAAGTGAAAGATTGAAGCGCACTGTCATCTCTCTGGTGGGAATAGGTGGACAAGGAAAAACAACTCTTGCCAAGAAAGTTTTTGACAACAAGAAGGTGGTCGAGGACTTCAAATGCCATGCATGGATCACAGTGTCTCAGTCCTACACAGTAGAACGATTGTTGAGGGACATGCTGCGGCAGTTgtgcaaagaaaaaaaggagagtCCTCCTCTCAGTGTTTCTACAATGGATCGAGCATCGCTGAGAGATGAAGTCAGAAACCGCTTGCGCGACGAGAGGTACGTCGTCGTGTTCGATGACGTGTGGAATGAAAGTTTTTGGGACGAAATGGAGTTTGCTTTAATAGATAACAAAAGAGGAAGTAAGATATTTATCACAACCAGGAAAAAGGAAGTTGCTATGCGTTGTATGAGATCTGCTTTTGTTCAGGTGCATGAGTTGCAGCCTTTAACTCCTGACAAATCTTTCGAATTGTTTTGCAAAAAGGCATTTGGATCTGACTTGGATGGACATTGTCCAAACAATCTCAAGAACATATCTACTGAAATTGTTGAAAGGTGTGAAGGTTTACCACTAGCAACTGTGGCCATTGGTGGCCTTCTATCTTGCAAAGATAGAGATGCAGGTGTATGGCAAAGATTTAGTAAAAATCTAAATCTAGAATTAGGGAGGAATTCCAATTTAACTGCCGTGACAAAAATTCTGGGTTTCAGTTATCATGATTTGCCTTACAATCTCAAACAATGCTTCTTGTATTTCGGAGTATATCCAGAAGACTACGAAATTGAAAAGGGGAGGTTGATTCGACAATGGGTAGCTGAGGGGTTTGTCAAATATGCTGAGACAGAAACTCTAGAGGAAGTTGCAGAACAATATTTAACTGAGTTGATCAACAGAAGTTTGGTTCAAGTATCTTCGTTTACTAGTGATGGCAAAGCTAAAAGCTGTCGTGTTCATGACATGCTACGAGCCATGATCcttgaaaaaatgaaagactTAAGTTTTTGCCATTTTGCTAATGAACATGATAACAGGTCAGAAAGTGGGATGATTCGTGGATGTTTGCATTTTTCCAATGGGGGATTTCAGAACCTAAAGCAGCTAGTACTCAGACGCTTGTATAAATTGCATTCCATCCGTATTGATGATGGAGCATTGCCTTCTCTCAAGAAGTTCACGTTAGTCCTTATCCCCCAACTCATGGAAGTGCCTTCTGGTCTCTACAACTTGCCAAAACTTGAAGTTTTCCATACTATTAATATGCCAAATGAATTTGAACAAAGCATTGACGAGAACAGAGGACAACATAAATGGATAAAAGAGCAGGTGCCATTTATACTGTTTCCAATTCCGGGATCTTGA 1917 0.4236 MEKVQEIAVDQLLPLLKKVVSAVKEVPTDVAGMKGKLDGVQANIHDADRMAAAEEGNSGEGVKAKVKQLVETSFRMEDIIDEYAIREERHLRGDDPGRAALPYKTVDFVKAMTSRLQFAYMNEDVKSEYGAIKDRNKSEDGSQTPFSGGNQDAAFRNLREAPLYVEEGDVVGFEGPLDELIGWMVSERLKRTVISLVGIGGQGKTTLAKKVFDNKKVVEDFKCHAWITVSQSYTVERLLRDMLRQLCKEKKESPPLSVSTMDRASLRDEVRNRLRDERYVVVFDDVWNESFWDEMEFALIDNKRGSKIFITTRKKEVAMRCMRSAFVQVHELQPLTPDKSFELFCKKAFGSDLDGHCPNNLKNISTEIVERCEGLPLATVAIGGLLSCKDRDAGVWQRFSKNLNLELGRNSNLTAVTKILGFSYHDLPYNLKQCFLYFGVYPEDYEIEKGRLIRQWVAEGFVKYAETETLEEVAEQYLTELINRSLVQVSSFTSDGKAKSCRVHDMLRAMILEKMKDLSFCHFANEHDNRSESGMIRGCLHFSNGGFQNLKQLVLRRLYKLHSIRIDDGALPSLKKFTLVLIPQLMEVPSGLYNLPKLEVFHTINMPNEFEQSIDENRGQHKWIKEQVPFILFPIPGS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0965 638 Gene3D Ribonuclease Inhibitor 514 625 IPR032675 -
Ssu9g0965 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 438 IPR027417 -
Ssu9g0965 638 Pfam Rx N-terminal domain 7 90 IPR041118 -
Ssu9g0965 638 Gene3D - 157 329 IPR027417 -
Ssu9g0965 638 PANTHER DISEASE RESISTANCE PROTEIN RP 34 525 IPR044974 GO:0006952
Ssu9g0965 638 Gene3D - 424 513 IPR036388 -
Ssu9g0965 638 Gene3D - 335 423 IPR042197 -
Ssu9g0965 638 Pfam NB-ARC domain 175 425 IPR002182 GO:0043531
Ssu9g0965 638 PANTHER - 34 525 - -
Ssu9g0965 638 Gene3D - 6 119 - -
Ssu9g0965 638 PRINTS Disease resistance protein signature 193 208 - -
Ssu9g0965 638 PRINTS Disease resistance protein signature 372 386 - -
Ssu9g0965 638 PRINTS Disease resistance protein signature 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0965 Ssu-Chr9 39545807 39549386 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0965 171 391 WRKY Transcription Factor Family AT5G45050 28.319 6.89e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0965 K13457 - gmx:102667903 691.804