Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0937 ATGTGGGTTTTGGCTGGCAGAGGTGGTTATGGAATTGATCttttcatgaaagttgtagagAGAGTTGTTTTTGCTGAATTTACTTGCATTCTCGCACTAGGAGGGTCCATAATGGGGATAATTGCAGGAGCCATCAAAGGCCATACCACAGAAGCTGGTTTTCTTGATGGGGTTTGCAAAGGAGCTGTCACAGGGGCCATTGCAGCACTAGAATTGCTGAATTTTGCTGATGATGATGAGCCACTGTCTAAGGTTGCCCTATTGAGGAGTTTATTAAATGGAAAGCTATATATGGAATGGATATGTCCAGCTGTTGCACAAGCCTATCAATGTCATATCAATGCACATGGAACAACTTACAGAGAAGAATCAGATATTTATAATGACATTGTCAGGATCAAAGGGATGGCTtggaaaatcatttaa 426 0.3897 MWVLAGRGGYGIDLFMKVVERVVFAEFTCILALGGSIMGIIAGAIKGHTTEAGFLDGVCKGAVTGAIAALELLNFADDDEPLSKVALLRSLLNGKLYMEWICPAVAQAYQCHINAHGTTYREESDIYNDIVRIKGMAWKII 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0937 141 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 141 - -
Ssu9g0937 141 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 7 141 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0937 Ssu-Chr9 39152989 39154515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0937 25 137 C3H Transcription Factor Family AT5G66070 31.967 2.27e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0937 - K19041 gmx:100799697 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0937 9 39152989 39154515 Ssu9g0937 9 39152989 39154515 ECH