Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0879 ATGATTTCTTCGTTGAGACAACCTGTTATAGGGATCACCGGTTCTGATCTTGTTTTGGGGCCAAGACATGCCGCCCCGATTAAGGCAAGGTCGTTTTTACCTTCTTTGTCAAGAGAAAAGGCTCAGAGATCTCTGGTTTCCGTGCAAAAGCCACTGCACATTGCTTCCCTTGGCGTTGGGAATTTTGTGTCGGTGAAGAGTGATGGAAGGGATGATTTGGTGAAGTGTGGAGCCTATGAGGCGGACAGATCAGAGGTTGAGGATGCAAGCACCCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTACAACAAGAAGGTTTTGAATGCCTACCCTTACCCTTGGCTGACTTCAACTCTCTCGCTTGCCTGTGGGTCTCTTATGATGCTGATCTCTTGGGCCACCCGGATTGCGGAAGCCCCCAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCCGTTGCTGTTGCACATACAATAGGACATGTAGCGGCGACGGTTAGTATGTCAAAAGTTGCGGTATCATTTACGCATATTATCAAGAGTGGTGAGCCTGCTTTTAGTGTTTTGGTTTCAAGATTTCTTTTGGGTGAGACCTTCCCTGTGCCAGTCTACCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCAGTGACCGAGCTCAATTTCAATATGACTGgtttTATGGGGGCCATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAATTACtatgcttgtttatctattttgtCTCTTGCAATTCTCACACCCTTCGCAATTGCTGTGGAAGGACCACAGATGTGGGTCGCTGGATGGCAAACAGCCATCTCTCAAATTGGACCCCAATTCATATGGTGGGTTGCAGCTCAAAGTGTATTCTATCATCTGTACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCCATTATTATCTTCCACACACCAGTTCAACCCATCAATGCTCTTGGTGCCGCCATTGCTGTCCTTGGAACCTTCTTATATTCACAGGCAAAACAATAG 1179 0.4444 MISSLRQPVIGITGSDLVLGPRHAAPIKARSFLPSLSREKAQRSLVSVQKPLHIASLGVGNFVSVKSDGRDDLVKCGAYEADRSEVEDASTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWVAGWQTAISQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAVLGTFLYSQAKQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0879 392 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 32 391 - -
Ssu9g0879 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 235 - -
Ssu9g0879 392 PANTHER SOLUTE CARRIER FAMILY 35 32 391 - -
Ssu9g0879 392 Pfam Triose-phosphate Transporter family 100 388 IPR004853 -
Ssu9g0879 392 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 391 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0879 Ssu-Chr9 38021834 38025269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0879 37 391 Antiporters AT5G54800 80.939 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0879 K15283 - gmx:100801832 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3427 6 76910154 76915128 Ssu9g0879 9 38021834 38025269 ECH
Ssu9g0879 9 38021834 38025269 Ssu9g0879 9 38021834 38025269 ECH
Ssu9g0879 9 38021834 38025269 Ssu6g3427 6 76910154 76915128 PCT