Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0875 ATGGCAATGAAAGCTGAGATTGTATCTAGGGACACAATAAAGCCATCCTCTCCAACCCCTGATCATCTTCGACACTTCAAACTCTCCCTCCTCGACCAATTGGCTCCTCCATTTTATGTCCCCATTCTCCTCTTTTACTCTGCCTCCGATGCCACAGCTTTTGGCACAGAGTTCAAAACAATATCTAACAGGTTGAAGGCTTCTTTATCAGATGTCCTCACTCTCTATTACCCATTTTGCGGAAGACTGAGAGGCAATTCAACCGTGGAGTGCAGCGACGAGGGCGTTCTTTACACCGAGTCTAAAGTCCCCATGGAGCTCTCAAACATTCTGGAAAGCCCTCACCTGCAAGAGATCAACGAACTTTTCCCATGCGATCCCTACAAGCCTGAAAGGGAAACACTAGGGAACATGGCAGTTCAGTTGAACCAATTCAGGTGTGGGGGTGTAGCACTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCAACAGCAGCATCGTTCCTCAACGCATGGGTCGCAACGTCACGGGGACAAGAAGGGAATAACGAATTGGTCCCACCTCGGATGGAAGACGCGGCCCTGCTTTTCCCACAGAGAAACATTCAAATGGACGTGACACGTGGCATGGTTGgccacaaaaacattgtcacaAAGAGGTTCGTATTTAACGAGACCAACATATATAGACTGAGGCAAAAACTCGGGTGCTTCAATTTCAATCCCACGCGTGTTGAAGCCGTGACAGCACTCATATGGAAATCATCGCTGGAAGCGGCGAAAGCGAGTTCAGGGGATCGAAAATTTCCCGCGTCTATGATATCCCACGCGGTGAACATTCGCAGCAGAATGGCCTCAACTTTGTCGAAGCATTGGATTGGAAATCTTTGGCAACAAGCGGTGTCTCCGTTGGTGGAAGTTGAAGGAGAAGTGGAGTTGCGAAATTTGGCAGAGAGAGTGAGGGAAACTGTAAGAAAAGTTGATGGAAATTATGTAAGTAAACTTCAGAGTGATGAGTTTTTTAAGGTAATTGAGTCTTTGAAGGAAACAAGGATAATGGCCTCAGAAAAGGGTATTCCATGTTATAGCTTTAGCAGTTGGATAAGATTTGGTTTCTATGAAGCGGATTTTGGATGGGGAAAGCCAACTTATGTGCGCACTGTCGGAGTGCCTATAAAAAATGTGGTAATTTTGATGGGCACAAAGATTGGGGATGGCATAGAGGcgtgggtaaccttgactacgTGTGACATGCTGCAATTTGAGCAAAATCCGGAACTTCTCGAGTTTGCGTCGTTTGATTCttaa 1311 0.45 MAMKAEIVSRDTIKPSSPTPDHLRHFKLSLLDQLAPPFYVPILLFYSASDATAFGTEFKTISNRLKASLSDVLTLYYPFCGRLRGNSTVECSDEGVLYTESKVPMELSNILESPHLQEINELFPCDPYKPERETLGNMAVQLNQFRCGGVALGVCFSHKIADASTAASFLNAWVATSRGQEGNNELVPPRMEDAALLFPQRNIQMDVTRGMVGHKNIVTKRFVFNETNIYRLRQKLGCFNFNPTRVEAVTALIWKSSLEAAKASSGDRKFPASMISHAVNIRSRMASTLSKHWIGNLWQQAVSPLVEVEGEVELRNLAERVRETVRKVDGNYVSKLQSDEFFKVIESLKETRIMASEKGIPCYSFSSWIRFGFYEADFGWGKPTYVRTVGVPIKNVVILMGTKIGDGIEAWVTLTTCDMLQFEQNPELLEFASFDS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0875 436 PANTHER F21J9.9 2 435 - -
Ssu9g0875 436 Pfam Transferase family 3 428 - -
Ssu9g0875 436 Gene3D - 1 207 IPR023213 -
Ssu9g0875 436 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 2 435 - -
Ssu9g0875 436 Gene3D - 214 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0875 Ssu-Chr9 37807987 37809297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0875 3 424 Monolignol Biosynthesis Gene Families AT5G48930 23.163 7.36e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0875 - K13065 gmx:100792323 689.108