Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0867 ATGCTTATACAAGCACCTTGGTTCTTAATAAGATCTATTGTAACGGTTAAGTCTCCAAAAGCATCAATGCTTATCCGGAAGTACCCCACCTCTTTTGCGCGAGTAGAGCAAAAGAAGAATGTAAGTGCTGCAAAATTAAGACTCACATCAAGCCAGGTGGAGAGGCTAAAGAAGAAGGCTAATGATCAACTTTCAAAAGAAGGGGTAAGACCTTACAGCAGATTTGAAGCTATTGCTGCTCATATATGGAGATGTGCATCAAAAGCTCGTCAACAAATTGGTGAGAACCAACTCACTGCAGTTCGGTCTGCTGTTAATATTCGCAATAGATTGATTCCGCCTCTCCCCCAAAATTATTTTGGGAATGCCTTGGCAAAAACGGTGACATCTAAATGTTATGTGGGAGATATCATATCAAACCCATTATGTTATGTTGCTCAAAAGATAAGGGAAGCAGTTAATGTGGTTACAAATGAGTATATAAGGTCacaattaaatgatgttaatttAGGCCGAGAGCAATTGGATTACATAAGGGCTTTTTTCTTGGGACAAGGACCACGTATGAGTGTCCCATATTCTGGGAATCACATCATTTCCGTCGTAAGTTGGATGACCATGTCAGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCTATGCATTTTGGTTTTGGACTTGTAACTAAACAAAATATGGTACGGCTTATTCAAAGCCCAGATGGAGACGGTGTTATTGTTTTCCTGAATTTCGAGACAGCACAATTGCAGCTTATCAAAAAATTCTTCTACGAGGATTGTTCTGAAGATCGAAACAGCAAGATGTGA 825 0.3927 MLIQAPWFLIRSIVTVKSPKASMLIRKYPTSFARVEQKKNVSAAKLRLTSSQVERLKKKANDQLSKEGVRPYSRFEAIAAHIWRCASKARQQIGENQLTAVRSAVNIRNRLIPPLPQNYFGNALAKTVTSKCYVGDIISNPLCYVAQKIREAVNVVTNEYIRSQLNDVNLGREQLDYIRAFFLGQGPRMSVPYSGNHIISVVSWMTMSVYEADFGWGKPMHFGFGLVTKQNMVRLIQSPDGDGVIVFLNFETAQLQLIKKFFYEDCSEDRNSKM 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0867 274 Gene3D - 31 265 IPR023213 -
Ssu9g0867 274 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 33 266 - -
Ssu9g0867 274 Pfam Transferase family 33 263 - -
Ssu9g0867 274 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 33 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0867 Ssu-Chr9 37574441 37578510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0867 19 264 Monolignol Biosynthesis Gene Families AT5G48930 29.365 5.48e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0867 K13065 - gmx:100803418 296.975