Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0844 ATGCAGCAAGATCACAGGAAAAAGAGTTCAGCAGAGATGGATTTTTTCTCTGAATATGGTGACGCCAACCGATACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATAACGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTTGAGCATATATCTGATGCTGCTCGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGACATTGTTGAAATAAAACACATTATGCTGCCTCCGTCGAGGAAGGACTTCAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTGATTAAAGCAAATGATGACTTGACAAAAGAACACTATcagttttttctttatcaattacTTCGAGCACTGAAGTATATTCACACAGCAAATGTCTATCATAGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGCAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCGAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATATTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTAGTCCATCAATTGGATCTGATGACAGATCTTCTTGGGACTCCTTCACTGGATACTATATCAcggGTACGTAATGACAAGGCAAGGAGATACTTAACTAGCATGAGGAAAAAGCAGCCTGTGCCAGTTTGCTCAAAAATTTCCCAATGCAGACCCTTTAGCACTAAGACTACTGGAAAGGTTGCTGGCTTTTGA 900 0.3811 MQQDHRKKSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHNGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPVCSKISQCRPFSTKTTGKVAGF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0844 299 Pfam Protein kinase domain 25 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0844 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 291 - -
Ssu9g0844 299 SUPERFAMILY Protein kinase-like (PK-like) 21 275 IPR011009 -
Ssu9g0844 299 ProSiteProfiles Protein kinase domain profile. 25 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0844 299 Gene3D Phosphorylase Kinase; domain 1 23 108 - -
Ssu9g0844 299 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 291 - -
Ssu9g0844 299 SMART serkin_6 25 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0844 299 Gene3D Transferase(Phosphotransferase) domain 1 109 284 - -
Ssu9g0844 299 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ssu9g0844 299 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0844 Ssu-Chr9 37061448 37065490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0844 1 287 MAP Kinase Gene Family AT2G42880 90.941 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ssu9g0844 Pkinase 1.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0844 - - gmx:100811788 561.222