Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0841 ATGCTGAAGGAAACTCAAAAAATGGTGTCCTTGGTGCTTTTAAGGCTTGCAAATTGGGTCATGCACCAGGTGCTTGTTAAATCATGGTATGGAGTTGCAAGGAAACTTAAAAGCTATGGATTTCATTGGGGTGATCTTTCAACTAAACCACTGCACCAACCTTCTCCATTCCCTAATATTGTCAACTGTGATTTGGAGGGTAGAGGCTCACAGACACTTGTTTGTGACTTTCACAAAGTCCTCTTAAGGACTCATTCCTTCTTTCCCTATTTCATGTTGGTTGCCTTTGAAGGTGGTAGCATTTTCAGGGCATTCCTCTTACTTTGTTCATGTCCTATACTGTGGATATTAAACTATGAAATGAAGCTTAGAGTCATGATCTTCATCTCCTTTTGTGGACTCAGAATGAAGGACATGGAAAACACTTCAAGAGCAGTTTTACCAAAGTTTTACTTGGAGAACCTCTACCTTGAGGCCTATGAGGTAGTGGCTTCAGTAGGGTCCAGAGTTTTCTTCACCACCATGCCTAGAGTGATGGTAGAAGGGTTTCTCAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAGTTGCACACTTCTGGCTGTTACTTCACTGGTTTGCTCTCTAAGTCTGGTTTGCTTGTGAAGCATAGTGCCCTCATGGATTATTTTGGAGATACAAAGCCTGACCTTGGGATTGGTAACACAAGTCTTCAtgatcaactttttatttctctttgcaAGGAAGCTTATGTGTTGATCAATGGAGAGGGAAAAGTCATGCCAAGGAACAGATACCCAAAGCCTTTAATATTTCATGATGGAAGACTAGCATTTTTGCCCACTCCCTCAGCAACCCTCTTTATGTTCGTGTGGCTTCCAATTGGATTTCTGTTAGCCGTTTATAGAATTTTTCTGGGTGTTTTCCTTTGTTGTAAGTTTACAATGGCATTAGGAGTATGGAGTGGCATAGATCTGAATTTCAAAGACAATAACCAACAAAGATCAGAGTCAAATAAAGGGGTACTTTATGTTTGTACCCACAGGACTCTCTTGGATCCAATTTTTCTTAGCACAACTTTGGGAAGGCCTTTGACTGCTGTCACATACAGCTTAAGCAAGGTGTCTGAGTTGATAGCCCCTATTAGGACCATGAGACTGACAAGGGACAGGCAACAAGATGGGGAAACTATGAAAAGGTTGCTTTGTGAAGGTGATTTGGTGGTGTTCCCTGAAGGAACAACTTGCAGGGAGCCATATCTATTAAGGTTCAGTTCTTTGTTTGCAGAACTGGCTGATGAGATATTGCCTGTGGCTATGAATGCTCATGTGAGCATGTTCTATGGGACCACAGCAAGTGGACTAAAGGTCTTGGacccaattttctttttcatgaatCCCAGGCCTAGGTATGACATTGAGATACTTGAAAAGCTTCCTAAAGAACTCACATGTGCTGGTGGAAGATCTAGTCATGAAGTGGCAAATTATATACAGAGACAGTTGGCTGATGTTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGGAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTCTGTTAA 1620 0.4086 MLKETQKMVSLVLLRLANWVMHQVLVKSWYGVARKLKSYGFHWGDLSTKPLHQPSPFPNIVNCDLEGRGSQTLVCDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPILWILNYEMKLRVMIFISFCGLRMKDMENTSRAVLPKFYLENLYLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIATELHTSGCYFTGLLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVLINGEGKVMPRNRYPKPLIFHDGRLAFLPTPSATLFMFVWLPIGFLLAVYRIFLGVFLCCKFTMALGVWSGIDLNFKDNNQQRSESNKGVLYVCTHRTLLDPIFLSTTLGRPLTAVTYSLSKVSELIAPIRTMRLTRDRQQDGETMKRLLCEGDLVVFPEGTTCREPYLLRFSSLFAELADEILPVAMNAHVSMFYGTTASGLKVLDPIFFFMNPRPRYDIEILEKLPKELTCAGGRSSHEVANYIQRQLADVLGFECTNLTRRDKYMMLAGNEGVVQEKKGRRFC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0841 539 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 26 533 - -
Ssu9g0841 539 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 282 531 - -
Ssu9g0841 539 SMART plsc_2 343 444 IPR002123 GO:0016746
Ssu9g0841 539 PANTHER ANCIENT UBIQUITOUS PROTEIN 26 533 - -
Ssu9g0841 539 CDD LPLAT 333 504 - -
Ssu9g0841 539 Pfam Acyltransferase 332 436 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0841 Ssu-Chr9 36948007 36950275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0841 12 531 Acyl Lipid Metabolism Gene Families AT1G06520 56.552 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0841 K13508 - gmx:100802208 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0841 9 36948007 36950275 Ssu6g3498 6 77915233 77918322 PCT
Ssu6g3396 6 76453137 76455259 Ssu9g0841 9 36948007 36950275 PCT