Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0835 ATGTCAGCAAACAGTTCTTTGCATGTGGAATTGTCGAAGAAGACTTCATTTCTGGGATTGAGATTATGGGTTTTGATTGGGATAGGTGTTGGTGCTTTTATTGTTGTGATTCTTTGTGTATTATCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTACTCTTTGTCCCAAATACCACATGTCTCAAAGGACATCAAAGTTGACAAGGTTGGGGTGCAGACTTCTCATGATCAAGCAGAAAGTGTAGCTATTCCTATTCATGACAAAGCAAATGAGAAGAATTCGGACAAGTTGTTAGTTCATTTGCGCATGAGCAAATCCAGCGATGCTGATAATATCAGTCAGTGCAGCTCAGTTTATCATCACGAGAGAGGATTTAGTTCAATGTCGGGGGAAGAAGGAAGCTCCGGGACTGTTAAGAAGCAGTCTACGATGTCATTTGGAGGAATGGTAACTGCCTCTCCTCTAGTTGGCTTGCCAGAAATTTCTCATCTTGGGTGGGGCCACTGGTTCACACTTAGAGATCTGGAACTTGCAACTAATCGCTTCTCTCCTGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGATTGATCAATGGATCTGACGTGGCAGTGAAGAAGATTCTTAACAACTTGGGACAAGCAGAGAAGGAATTCAGGGTGGAAGTAGAGGCTATTGGCCATGTTAGACATAAAAATCTTGTGCGCTTACTTGGATATTGCATAGAAGGAGTTCACAGGTTGCTGGTGTATGAATATGTGAACAATGGTAACTTAGAGCAATGGTTACATGGGGTCATGAGCCAACAAGGGACACTTACCTGGGAAGCTCGGATGAAAGTTATAACTGGCACTGCCAAAGCTTATGTGGCACCAGAATATGCAAATACAGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGCAGTTACTGGAAGGGATCCTGTGGACTACTCACGTCCTGCTAATGAGGTGAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGGAGGTCTGAGGAAGTTGTGGACTCGAGGCTTGAAGTGAAACCATCAACACGTGCTTTAAAGCGTGCTCTTCTGGTTGCTCTTAGGTGTGTTGATCCTGAAGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCCGACGAATATCCATTCCGAGAGGATcgaagaaatagaaaaagccgCACTGCCAGCATGGAAATTGAATCTCTGAAGGATATTTCCGGTCCATCTGATGCTGAAAAGGTGAAGGGTTTTGAAGGCTATGCACCAGAAACAACTCAAGGGATACGATATGATATACCAAATTTGCAAGAGGATGGAGTCAGGGTGCCTACACCAAATGACACACCAGCAGAAGGATGA 1437 0.4363 MSANSSLHVELSKKTSFLGLRLWVLIGIGVGAFIVVILCVLSVWVMFRRKSRRSLDKYSLSQIPHVSKDIKVDKVGVQTSHDQAESVAIPIHDKANEKNSDKLLVHLRMSKSSDADNISQCSSVYHHERGFSSMSGEEGSSGTVKKQSTMSFGGMVTASPLVGLPEISHLGWGHWFTLRDLELATNRFSPENVIGEGGYGVVYRGRLINGSDVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGVMSQQGTLTWEARMKVITGTAKAYVAPEYANTGLLNERSDIYSFGVLLLEAVTGRDPVDYSRPANEVNLVEWLKMMVGTRRSEEVVDSRLEVKPSTRALKRALLVALRCVDPEAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESLKDISGPSDAEKVKGFEGYAPETTQGIRYDIPNLQEDGVRVPTPNDTPAEG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0835 478 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Ssu9g0835 478 PANTHER OS01G0323000 PROTEIN 299 449 - -
Ssu9g0835 478 PANTHER OS01G0323000 PROTEIN 2 298 - -
Ssu9g0835 478 PANTHER RECEPTOR-LIKE KINASE PLANT 299 449 - -
Ssu9g0835 478 PANTHER RECEPTOR-LIKE KINASE PLANT 2 298 - -
Ssu9g0835 478 MobiDBLite consensus disorder prediction 412 478 - -
Ssu9g0835 478 Pfam Protein tyrosine and serine/threonine kinase 191 297 IPR001245 GO:0004672|GO:0006468
Ssu9g0835 478 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Ssu9g0835 478 ProSiteProfiles Protein kinase domain profile. 188 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0835 478 Gene3D Transferase(Phosphotransferase) domain 1 293 420 - -
Ssu9g0835 478 SUPERFAMILY Protein kinase-like (PK-like) 172 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0835 Ssu-Chr9 36757639 36804437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0835 151 434 Receptor kinase-like Gene Family AT4G02010 34.174 6.81e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Ssu9g0835 PK_Tyr_Ser-Thr 1.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0835 - - ini:109156125 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0835 9 36757639 36804437 Ssu9g0835 9 36757639 36804437 ECH