Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0820 ATGGCAAAAGGGTATGCTCTATGGTTCTTCTTTATTGAAATCTTGGTACATTTTTCCATATCAAGCAGTGCCAAAGTTCCTTCAATTATAGTGTTTGGAGACTCCTCTGTGGATTCAGGTAACAACAACTTCATTCCAACCATTGCCAGGAGCAACTTTGAGCCATATGGCAGAGATTTTTTCAATGGCAATCCTACTGGTCGCTTCTCCAATGGCCGCATTGCCCCTGACTTCATCTCTGAGGCCTTTGGCCTTAAGCAAACAGTTCCCGCATACTTGGATCCGGCTTATAACATATCAGATTTGGCCACTGGTGTGTGTTTTGCATCTGCTGGAACTGGATTTGACAATGCTACTTCAAATGTTGCTGATGTCATACCTCTATGGAAAGAAGTTGAGTACTACAAGGAGTACCAAAAGAAACTGAGAGCACATCTTGGTGATGAGAAGGCTAATGAAATAATAAGAGAGGCTTTATATTTGGTTAGCATAGGAACCAATGACTTCCTTGAGAACTACTACGCACTCCCTGAACGAAGGTGTCAGTTCACTACTGTTCAGCAGTATGAGGACTTCCTCATTGGGCTTGCCGAAAATTTCTTTAAGGAAATTTATGGCCTTGGGGCAAGGAAAATTTCTCTCACAGGGTTGCCTCCTATGGGGTGTTTGCCATTGGAGAGAGCAATAAACATTTTGGAGTACCATGATTGTGTGGAGGGGTACAATAATTTGGCTTTGGAGTTCAATGGAAAGTTGGGGTGGTTAGTGGCAAAGCTGAACAAGGATCTCCCTGGACTTCAATTGGTAGATGCAAATGCTTATGATATCTTTCTTCAAATCGTTACACAACCCTCTCGTTTTGGTTTTGAGGTCGCAGGAAGGGGATGCTGTGGAACAGGAAGATTTGAGATGGGTTTCTTGTGCGACCCAAAAAGCCCATTTACATGCAAAGATGCAAATAAGTATGTATTTTGGGATGCCTTCCACCCCTCAGAAAAAACAAGTCAGATAgtctcaaattatttaatagaaaaatatctaGCAAAGTTTCGTTGA 1056 0.4148 MAKGYALWFFFIEILVHFSISSSAKVPSIIVFGDSSVDSGNNNFIPTIARSNFEPYGRDFFNGNPTGRFSNGRIAPDFISEAFGLKQTVPAYLDPAYNISDLATGVCFASAGTGFDNATSNVADVIPLWKEVEYYKEYQKKLRAHLGDEKANEIIREALYLVSIGTNDFLENYYALPERRCQFTTVQQYEDFLIGLAENFFKEIYGLGARKISLTGLPPMGCLPLERAINILEYHDCVEGYNNLALEFNGKLGWLVAKLNKDLPGLQLVDANAYDIFLQIVTQPSRFGFEVAGRGCCGTGRFEMGFLCDPKSPFTCKDANKYVFWDAFHPSEKTSQIVSNYLIEKYLAKFR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0820 351 CDD SGNH_plant_lipase_like 27 346 IPR035669 -
Ssu9g0820 351 SUPERFAMILY SGNH hydrolase 28 346 - -
Ssu9g0820 351 Pfam GDSL-like Lipase/Acylhydrolase 29 342 IPR001087 GO:0016788
Ssu9g0820 351 PANTHER GDSL ESTERASE/LIPASE EXL3 3 350 - -
Ssu9g0820 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 350 - -
Ssu9g0820 351 Gene3D SGNH hydrolase 16 348 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0820 Ssu-Chr9 35581175 35585801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0820 27 344 Pollen Coat Proteome AT1G75910 35.938 7.94e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0820 - - gmx:100778745 648.662