Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu9g0811 | ATGGGTTGCTTCTTCGCTTGCTTCAGAGCCCGCGACGCCACCGCTACAGTGCCTTCTTCTCGTTCCAACAAACCCAAAGATGTTGCGGTCTCGAGAAATCGTTTATCCACTTTATTTTTATCCGAAgagagagaagactCTGTTGTGCGTGATGATGGGAAGAGTTTTGAAGTGGGATCTCAGAAAGGTGACAGTGAGGCCAAGTGTCTCAAAGCTGGCAGTACCTTGGCAAGGACCCCTCTTGGGAAAGTTCACCTTGATGGTCAACCTTTCAATCCCTCAACACCTGTAAAACATTGTGAGGAAGGGGGGAAGAGAACTGATTCTTTAGAGCATACACCAAGCAGCTGTATCTCCAATGCACAAAGTACTCAATGTGACTCTCTTGATTCTGCGGAAGGAATTAGGACAGGGAGTCTTCACAGTTTGGATAGGAATGACAAGAATACAGCTTCTGTTTCACCTTGGCCATCGGCCATATACACTAAGAGGAGGAACAAGTCTGTTCATTTTGAATGTGACACTGATTTATTATCCTGTGACTCGTCTGATTATGGCAGACGGCATATGAAGAAAACAGATTCCCCAAATAATGAGAGTGCATATAAACCATCACCTTATCCTACCCCAATGAAGCTATCTGATGAGATGCAAACTCCTGGAACTGTTTACCCTGCAACAAAAGAAGACTTGCCAAATGGTAAGCCTCGAGTTAAGTCCCAGTTTGTGTATTCAATTAACAACCCTGGTGATGATGTCTCTCAGAAGATACTTGAGGAAGAGGATCATCCCCCTAAACAAGATTCAAGGAAGCTGAGTGAATCAGATGAGCAGTCTCAAATTGCAACTTCAACACCTGAAAAAGGGTTAAAGAAAATGTCttatgaaaatgaatgtaaggtGGAGGAAAGCTTATCTTCCTGGTTGAAGCCTGCAACTGTCATTCTGGAGGAGAGAAACAAGAGAATGCAGATTGCTTATAATCAGGTCCGCAAAACACCTGCTGAAAGGCCTATCATTGGGATGGTTGCAGCACACTGGAATGAGGATGAGGATTCTCAAGTTCCTCCTCCTAAGTGGTGGGATGGTAACGGCATACCAAATTCAaccaataaatataaagaaGATCAAAAAGTGAATTGGCATGCAACGTCATTTGAAGAGAGGTTGGAAAAGGCATTATCTGAGGAGAGTGTCATCTCTCAAAGGAAGGATGTATGTGGAAAATCAATTCCTTTTGATGAGAACGAAGAAAGTGATACTGCACTATCTCAGCTGCAATCTTCAACTCATCCACAGTCCGTGGTGTCATTTTGA | 1317 | 0.4222 | MGCFFACFRARDATATVPSSRSNKPKDVAVSRNRLSTLFLSEEREDSVVRDDGKSFEVGSQKGDSEAKCLKAGSTLARTPLGKVHLDGQPFNPSTPVKHCEEGGKRTDSLEHTPSSCISNAQSTQCDSLDSAEGIRTGSLHSLDRNDKNTASVSPWPSAIYTKRRNKSVHFECDTDLLSCDSSDYGRRHMKKTDSPNNESAYKPSPYPTPMKLSDEMQTPGTVYPATKEDLPNGKPRVKSQFVYSINNPGDDVSQKILEEEDHPPKQDSRKLSESDEQSQIATSTPEKGLKKMSYENECKVEESLSSWLKPATVILEERNKRMQIAYNQVRKTPAERPIIGMVAAHWNEDEDSQVPPPKWWDGNGIPNSTNKYKEDQKVNWHATSFEERLEKALSEESVISQRKDVCGKSIPFDENEESDTALSQLQSSTHPQSVVSF | 438 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu9g0811 | 438 | PANTHER | ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT | 1 | 81 | IPR039300 | GO:0007142 | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 182 | 196 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 417 | 438 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 110 | 130 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 261 | 291 | - | - | |
| Ssu9g0811 | 438 | PANTHER | - | 81 | 425 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 82 | 130 | - | - | |
| Ssu9g0811 | 438 | PANTHER | ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT | 81 | 425 | IPR039300 | GO:0007142 | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 398 | 416 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 398 | 438 | - | - | |
| Ssu9g0811 | 438 | PANTHER | - | 1 | 81 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 182 | 236 | - | - | |
| Ssu9g0811 | 438 | MobiDBLite | consensus disorder prediction | 261 | 275 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu9g0811 | Ssu-Chr9 | 35391761 | 35399612 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu9g0811 | - | - | gmx:100527635 | 725.702 |
Event-related genes