Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0809 ATGGGTGCTGAAAGTGTAGATTTTTCCGTAAGTGTGATCAATGAAGAGGTGGTGGCAGCAGTGCTACCAATGCAAGAACATTGGCTCACACTTTCTAACCTTGACCTACTTCTACCTCCGTTGGATGTAGGAGTCTTCTTTTGCTACAAGAACCCCATGCCCACTTCCACCACCTTAGGGGACAGTGCCACCAACAAAATGACCTTTGGATCCATGGTGGGGTCTCTAAAAAAAGCCTTAGCACAAGCTCTAATCTCCTATTATGCATTTGCAGGTGAAGTGGTCCCCAACAATATGGGTGAACCCGAGGTGCTTTGCAATAATCGTGGGGTTGATTTTGTTGAAGCTGTGGCAGATGTTGAGCTAAAATGTCTCAACTTTTACAACCTAGATGACACCATTGAAGGGAAATTCGTtccaaagaagaagaatggtGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGTGGGATAATAGTGGCGTGCACATTTGACCATCGCATAGCAGATGCCTATTCAACAAACATGTTCCTTGTTTCATGGGCTGAGATGGCCCAGCCCACCAAGCCCAACACTACCATTGTCGCTGCCACCACTTTTTGCCTCCCATGTTTTCGTCGTTCCCTCCTCAACCCTCGCCACCCAGGTTCCTTCCACCCTTCCCTACACCACATGTACATTCCCGTCTCCGAGCTCCCTCCCACTCCGACCACTGCCTCTACCGCTCTCCTCAACCGCATATACTACGTCCCGGCAGAGCAGCTCCACCATATGCAGTCCCTCACTACCACACACACAAAGCTTGAGTGTTTCTCCGCATTCTTGTGGAAGATGGTGGCACGTGCGACTTCAAGagacaaaaatagtaaaagtgtTGTGGCCAAAATGGGCATCGTGGTTGATGGAAGGAATAGACTTGGCAATGGTGACAAAGAGATAGAGGCAACGATGGAGTGTTATTTTGGGAACGTGCTTTCCATACCCTTTGGTGGGAAACTAGTGGAGGAGTTGGTGGAGGAGCCGCTAGGGTTTGTGGCGGAGGCGGTTCATAAGTTTTTGGCAGCGGCGGCCACAAAGGAGCACTTCTTAGGGCTTATTGATTGGGTGGAGGCTCACCGGCCAGTCCCTGGGTTGGCGAGGATTTATTGTGGTGATGCCAACGAGGGACCAGCCTTTGTGGTGTCCTCCGGGCAGAGGTTCCTGAAGGACAAGGTGGATTTTGGGTGGGGGAAGGTTGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGTTGGTTATGTTATGCCAATGCCAAGTCCCTTGGGGAATGGTGATTGGGTTGTTTACATGCACCTTGTGAAGAGGCAGTTGGAGATCATAGAGTCTGAGGCTGCTCATGTGTTTAGGCCTTTAACATGGGAGTACCTTAATCAATAA 1422 0.4873 MGAESVDFSVSVINEEVVAAVLPMQEHWLTLSNLDLLLPPLDVGVFFCYKNPMPTSTTLGDSATNKMTFGSMVGSLKKALAQALISYYAFAGEVVPNNMGEPEVLCNNRGVDFVEAVADVELKCLNFYNLDDTIEGKFVPKKKNGVLAVQATSLKCGGIIVACTFDHRIADAYSTNMFLVSWAEMAQPTKPNTTIVAATTFCLPCFRRSLLNPRHPGSFHPSLHHMYIPVSELPPTPTTASTALLNRIYYVPAEQLHHMQSLTTTHTKLECFSAFLWKMVARATSRDKNSKSVVAKMGIVVDGRNRLGNGDKEIEATMECYFGNVLSIPFGGKLVEELVEEPLGFVAEAVHKFLAAAATKEHFLGLIDWVEAHRPVPGLARIYCGDANEGPAFVVSSGQRFLKDKVDFGWGKVVFASYHFPWGGEVGYVMPMPSPLGNGDWVVYMHLVKRQLEIIESEAAHVFRPLTWEYLNQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0809 473 Gene3D - 7 229 IPR023213 -
Ssu9g0809 473 Gene3D - 230 457 IPR023213 -
Ssu9g0809 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 468 - -
Ssu9g0809 473 Pfam Transferase family 9 461 - -
Ssu9g0809 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0809 Ssu-Chr9 35318889 35323798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0809 32 456 Monolignol Biosynthesis Gene Families AT5G48930 26.067 2.89e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0809 - - gmx:100785067 784.252