Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0797 ATGGGTGCTGAAAATGTAGATTTCTCCGTAAGTGTGATCAATGAAGAGGTGGTGGCAGCAGTGCTACCAATGCAAGAACATTGGCTCCCACTTTCTAACCTTGACCTACTTCTACCTCCGTTGGATGTAGGAGTCTTCTTTTGCTACAAGAACCCCATGCCCACTTCCACCACCTTAGGGGACAGTGCCACCAACAAAATGACCTTTGGATCCATGGTGAGGTCTCTAAAAAAAGCCTTAGCACAAGCTCTAATCTCCTATTATGCATTTGCAGGTGAAGTGGTTTCCAACAATATGGGTGAACCCGAGGTGCTTTGCAATAATCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTAAAGTGCCTCAACTTTTACAACCCAGATGACACCATTGAAGGGAAATTCGTtccaaagaagaagaatggtGTGCTTGCTGTCCAGGCAACTTCACTCAAGTGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCCTATTCAACAAACATGTTTCTTGTTTCATGGGCTGAGATGGCCCAGCCCACCAAGCCCAACACTGTTGTTGTTGCTACCACCACTTTTTGCCTCCCATGTATCCGTCGTTCCCTCCTCAACCCTCGCCACCCAGGTTCCTTCCACCCTTCCCTACATCACATGTACATTCCCATCTCCGAGCTACCTCCTCCTCCAGCCACTACCTCCACTGCTCTCCTCAGCCGCATATACTACGTCCCGGCAAACCAGCTCCACCGCATGCAGTCCCTTGCTGCCATACGCACAAAGCTTGAGTGTTTCTCTGCATTCTTGTGGAAGATGGTGGCACGTGCGACCTCAAGAGACAAGAATAGTAAAAGCGTTGTGGCCAAAATGGGCATTGTGGCAGAGTGCTTGAATCCTGATACGCTCTGGGACAGCCTCAATGATGCCGTTAACACAATCATACGGGGAGATGAGACCACCGAGACTGGAGACCTCTTGCCCCCATGTGTTGAAGCTGCACTGAACCTGGGTTGCAAACCTGTGAGAACTTCCAGAAGTGATCGGCACAATAACCCCAGGACTAGTCCACGTAGACATACacgaaagaaaaagaaaatggaaattcTGGATTGA 1134 0.4753 MGAENVDFSVSVINEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPMPTSTTLGDSATNKMTFGSMVRSLKKALAQALISYYAFAGEVVSNNMGEPEVLCNNRGVDFVEAVADVELKCLNFYNPDDTIEGKFVPKKKNGVLAVQATSLKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAQPTKPNTVVVATTTFCLPCIRRSLLNPRHPGSFHPSLHHMYIPISELPPPPATTSTALLSRIYYVPANQLHRMQSLAAIRTKLECFSAFLWKMVARATSRDKNSKSVVAKMGIVAECLNPDTLWDSLNDAVNTIIRGDETTETGDLLPPCVEAALNLGCKPVRTSRSDRHNNPRTSPRRHTRKKKKMEILD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0797 377 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 302 - -
Ssu9g0797 377 Pfam Transferase family 9 303 - -
Ssu9g0797 377 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 302 - -
Ssu9g0797 377 Gene3D - 7 229 IPR023213 -
Ssu9g0797 377 MobiDBLite consensus disorder prediction 348 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0797 Ssu-Chr9 35185117 35196190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0797 32 298 Monolignol Biosynthesis Gene Families AT5G48930 27.178 9.56e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0797 - - gmx:100776080 481.87