Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0791 ATGCTCGCATGTGCTGGCCCTACTTATTTTACAATTAGTATGGGTTATAAAACATGGCGGCCCAGACCCCAACATAAAGATGAACTAGAATACATTCAAGCCTTCCTCAAGGATGCTGATAGAAGGGCTGCAGAAGAAGGAGACAACACAAACGAGGGGATCAGAACATGGGTGAAACAGTTGAGGGAAGCATCTTTTCGCATAGAAGATGTCATTGATGAATACATGATCTATGTGGAGCAACAGCCTCATGATCCTGGATGTGCAGCTTTACTCTGTGAGATTATTCACTTTATTGAAACTCTGATGCCTCGTCATCAAATAGCATCAGAGATTCAGCAGATCAAGTCATTTGTTCACGGAATCAAGCAACGAGGTAAAGATTATCACTTCCAAATCCAACCTTCAGTTGAACAAGGACAAAGTAGTTATAGAGGTAGCCGAAGTGTTCAATGGCATGACCCTCGAATGCATTCCCGTTACCTTGATGAAGCTGATGTTGTTGGCTTTGAAGGCCCAAGGGATGAATTGATTGGTTGGTTAATAGAGGGACCGGCAGAGCGCAGTGTCATCTCTGTGGTAGGAATGGGAGGGCTAGGAAAAACCACTCTTGTCAGCAGAGTTTTCAACAACAAGAAGGTGATTGGACACTTTGATTCCCATGCATGGATCACGGTGTCTCAATCCTACACTGTGGAAGGGTTGATGAGAGACTTGTTGAAGAaattatgcaaagaaaaaagggaGGACCCTCCTCAAGATATTTCTGAAATGGATGGACATTCATTGATTGGTGAAGTGAGAAACTATTTGCGGCAAAAGAGGTACGTTGTCATTTTTGATGATGTATGGAATGTAGAACTTTGGGGTCAGATTGAAAGTGCCACGCTTGATGATAAAACTGGAAGTAGAATATTAATCACAACTAGGAAGAAGGATGTTGCAGATTCTTTTAAGAGCTCTCATTTTGATCATGCGCATGAGCTGAAACCTTTAACTTTAGAAAAATCTATGGAACTCTTTTGTAAGAAGACATTCCGATTTGACTACAATGGATGTTGTCCAGATCATCTCATGAATATATCTTctgaatttgttaaaaaatgcaAGGGTTTACCACTGGCGATTGTGGCTATTGGTGGTCTTTGTCTGGCAAAGAAAAGACTACATTTGAATGGGAAAGAATTAGGCAAGTGGATAGCTGAAGGATTTGTAaaagatgaagaaggaaaaactTTGGAAGACGTTGCACAACAATATTTAACAGAGTTGATTGGTAGAAGTTTAGTGCAAGTGCCTTCATTTACCATAGATGGCAAAGCTAGGAGTTGTCATGTTCATGACCTATTACGTGATATGATCCTTAGAAAATTCAAGGATTTAAGTTTCTGCCAGCATATTAATAAAGAAGATGAGTCAATGTCAAGTGGGATGATTCGACGCTTATCAATAGCAAACATTTCCAATGATTTAATGGGGAGTACTGAAAGCTCGCACACTCGGTCACTACTTGTTTTTACAGGTGAAGAATCAGCATTAACCAATGAATTTGCGCAAAGAATCCCTACAAAATACAGGCTATTGAAGGTACTTGATTTTGAGGATGTACGGTTGGATTTTGTTCCTGAAAATTGGGGGGAATCTAGCACACTTGAAGTATTTAAGCTTAAAGGGGTCATGGATTCAAActga 1692 0.3895 MLACAGPTYFTISMGYKTWRPRPQHKDELEYIQAFLKDADRRAAEEGDNTNEGIRTWVKQLREASFRIEDVIDEYMIYVEQQPHDPGCAALLCEIIHFIETLMPRHQIASEIQQIKSFVHGIKQRGKDYHFQIQPSVEQGQSSYRGSRSVQWHDPRMHSRYLDEADVVGFEGPRDELIGWLIEGPAERSVISVVGMGGLGKTTLVSRVFNNKKVIGHFDSHAWITVSQSYTVEGLMRDLLKKLCKEKREDPPQDISEMDGHSLIGEVRNYLRQKRYVVIFDDVWNVELWGQIESATLDDKTGSRILITTRKKDVADSFKSSHFDHAHELKPLTLEKSMELFCKKTFRFDYNGCCPDHLMNISSEFVKKCKGLPLAIVAIGGLCLAKKRLHLNGKELGKWIAEGFVKDEEGKTLEDVAQQYLTELIGRSLVQVPSFTIDGKARSCHVHDLLRDMILRKFKDLSFCQHINKEDESMSSGMIRRLSIANISNDLMGSTESSHTRSLLVFTGEESALTNEFAQRIPTKYRLLKVLDFEDVRLDFVPENWGESSTLEVFKLKGVMDSN 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0791 563 Pfam NB-ARC domain 174 388 IPR002182 GO:0043531
Ssu9g0791 563 Pfam Rx N-terminal domain 26 84 IPR041118 -
Ssu9g0791 563 Gene3D - 157 323 IPR027417 -
Ssu9g0791 563 Gene3D - 332 400 IPR042197 -
Ssu9g0791 563 PANTHER - 398 553 - -
Ssu9g0791 563 PANTHER - 25 387 - -
Ssu9g0791 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 386 IPR027417 -
Ssu9g0791 563 PRINTS Disease resistance protein signature 190 205 - -
Ssu9g0791 563 PRINTS Disease resistance protein signature 270 284 - -
Ssu9g0791 563 PRINTS Disease resistance protein signature 369 383 - -
Ssu9g0791 563 PANTHER DISEASE RESISTANCE PROTEIN RP 398 553 IPR044974 GO:0006952
Ssu9g0791 563 PANTHER DISEASE RESISTANCE PROTEIN RP 25 387 IPR044974 GO:0006952
Ssu9g0791 563 Gene3D - 24 109 - -
Ssu9g0791 563 CDD RX-CC_like 26 123 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0791 Ssu-Chr9 34904448 34906698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0791 163 373 WRKY Transcription Factor Family AT4G12020 25.339 4.32e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0791 K13457 - gmx:100819372 793.882