Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0785 ATGGGACGGTGCAAGTCACATAGTTTGGCTCTTGCACATCTTGTCGCATTCTGTGTCTTCAGCTGCCTGGTCAACGTTGCACAGGTTCAAGCTGCAAACGCCACCACAGATCCTTCCGAAGCAAGAGTCTTAAATTCAATCTTTAGCAAATGGGGTATATCGGCAAACCCAACTCAATGGAATATTAGCGGTGAACTATGCAGTGGAAGTGCGATCGACAATACCGTCACCATTGGTGACCAAAATTTCAACCCATTCATCAAATGTGATTGTTCCTATGACAGTGGAACTACTTGCCACATCACAGCACtGAAGGTTAATGCATTAGACGTGGTTGGTGAAATTCCAGAAGAGCTATGGACTTTCACTCACCTCACTAATTTAAATCTTGAAAAGAATTACTTGACGGGTTCTCTACCTCCAGCCATTGGAAATCTAACTCATATGCAATCCTTGATCCTTGGCAACAATAATTTATCGGGGGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTAACATGGCTGAATTTGGTGCAAACCAAATTGTCAGGACCTCTTCCACCTGAAGTTGGGAAATTGACAAAGTTAGAATATCTCAACCTTGAGAGTTCATCAGGAATTCGTGGTCCAATTCCTTCCACATTTGCAAATCTTGAGAATTTAGTCTACGTATTTGCTTCAGATGTGGAATTCACAGGAACAATACCAGCCTTTATAGGGAATTGGTCTAAGCTTCAATTATTGAAAATAAGTGGTTTATCAAATGGGACCTCTTCACTGGAATTTGTAAGGAATTTAAAATCTTTGACTATCTTAGAATTGAGCAATAACAATATTTCTGGTTCAATTCCATCTGCCATAGGAGAGTTTCAAGAATTGATTCAGCTGGATTTAAGCTTCAATAACATCACAGGACAAATTCCAGGATCAATTTTCGATTTACGTTCTTTGATTTACTTGTTTCTTGGAAACAACACACTTAATGGCACTCTCCCGATGCAGAaaagttcatctcttcaaaataTAGACTTGTCATACAATGATATATCAGGTGACCTCCCCTCTTGGGTAAACGAACCAAGTTTACAACTGAATTTAGTTGCCAACAATTTGGAATTAAATTCTTCATACGTCAGtGCCTTGCCTTATGGGCTCAATTGTCTCCAGAAAAGTTTTCCTTGCAATCGTGATGCTGGAAGATATTTTGACTTTGCAATCAAGTGTGGCGGTCTCCAACTGACATCGTCAGATGGAACTGTGTATGAAACGGACAATGGACAGCTTGGTCCTGCTACATATTTTGTTACTGATACAAATAGATGGGCAGTTAGTAATGTGGGAATATTTTCAGGGAACactaatattaaatacaaaagttTTGTGTCTGATCAAGTCTCTGGTACTGTGAATTCAGAGCTCTTCCAAGCAGCACGACTCTCTGTTTCGTCTTTAAGATATTATGGCCTAGGACTGGCAAATGGTTTTTACAACATCACCCTTCACTTTGCCGAAACAGCTATTCTAGATGGTACCACATGGAAAAGCTTGGGGAGACGGGTCTTTGATATTTATATTCAGGGGAATTGTGTTTTGAAggattttgacataaaaaaggAAGCTGGGGGTCTTTCTTTCAAAGCTGTCCAACAGCAATTTAGGTTTGAAGTGTCAAAAAACTATGTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGGGTTGCTGCGTACCAGTTCCAGGTACTTATGGTCCCTTGATTCAAGCCATCCAAGTTATCCCAGATTTCCCAACTCCGAGTAGTAAGAAGAATAGAATCGGTCTAATCACTGGAATTGTCATTGGAGTTGTAAGCTTTCTGTCAATGTTTGTGATTTTTTGTATCATTCAGAGGAGAAAACGCCATGACGATGATATAGAGCTTTTAGAAATTGATACAAAGCCATACATTTTCAACTATTCTGAGTTAAAGAACGCTACAAATGACTTTAATCTTGAAAATAAGCTTGGAGAAGGAGGTTTTGGACCTGTTTACAAGgGGACACTTAATGATGGAAGGGATATTGCCGTGAAACAATTATCAGTAGGATCCCGTCATGGAAAGAGTCAATTTGCAACTGAGATTACTACTATATTAGCTGTGCAGCATCGTAATCTGGTCAAATTATATGGATGTTGCATCGAGGGGAGTAAAAAACTGCTTGTCTATGAGTATCTAGAAAATAAGAGCCTTGATCAAGCATTATTTGGAAATCGTTTAACCCTTAATTGGTCCACACGTTATGATATATGCTTGGGTGTTGCCAGAGGTTTAACCTATTTACATGAAGAGTCACGGCTCCGTATTGTACACCGTGACGTGAAGGCTAGCAACATTTTACTTGATTGTGATCTTATCCCAAAATTATCTGATTTTGGGTTGGCCAAATTGTATGATGATAAAATGACCCATATGAGCACCCGCGTGGCTGGGACAATTGGATATCTTGCACCAGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATGTATTTTCCTTCGGTATTGTGGCTCTAGAGGTGGTTAGTGGGAGGTCAAATTCTTGTTCAAGTTTGGAAGGAGAGAAGGTGTATCTTCTTGAATGGgcGTGGCAGCTTCATGAAAACAACCTCATAACTGATCTAGTAGATCCTAGAATTTCAGAATTCAATGAGGAAGAAGTAAAATGCATTGTAGGAATAGTGCTTTTGTGTACTCAGGCATCGCCAGCATTACGACCATCAATGTCACGTGTGGTGGGAATGCTTTCAAAAGATATTGAAGTGAGCACCGTAACTACAAAGCCTGGATACCTGACTGACTGGACTTTTGAGGATGTGACCAACTTGATGACTAATATTGAAATCAAAGGATCTGATAAAAGTTATCAAAATCCATCAGCAAGTACCAGCATAGTGAGTCGTGTAGACCTGTCACCAATAAGTGCTTCTAAACCGATCCTTAATAAGACTCTTGACGAGGTTTGGTAG 3009 0.3938 MGRCKSHSLALAHLVAFCVFSCLVNVAQVQAANATTDPSEARVLNSIFSKWGISANPTQWNISGELCSGSAIDNTVTIGDQNFNPFIKCDCSYDSGTTCHITALKVNALDVVGEIPEELWTFTHLTNLNLEKNYLTGSLPPAIGNLTHMQSLILGNNNLSGELPKELGNLTELTWLNLVQTKLSGPLPPEVGKLTKLEYLNLESSSGIRGPIPSTFANLENLVYVFASDVEFTGTIPAFIGNWSKLQLLKISGLSNGTSSLEFVRNLKSLTILELSNNNISGSIPSAIGEFQELIQLDLSFNNITGQIPGSIFDLRSLIYLFLGNNTLNGTLPMQKSSSLQNIDLSYNDISGDLPSWVNEPSLQLNLVANNLELNSSYVSALPYGLNCLQKSFPCNRDAGRYFDFAIKCGGLQLTSSDGTVYETDNGQLGPATYFVTDTNRWAVSNVGIFSGNTNIKYKSFVSDQVSGTVNSELFQAARLSVSSLRYYGLGLANGFYNITLHFAETAILDGTTWKSLGRRVFDIYIQGNCVLKDFDIKKEAGGLSFKAVQQQFRFEVSKNYVEIHLFWAGKGGCCVPVPGTYGPLIQAIQVIPDFPTPSSKKNRIGLITGIVIGVVSFLSMFVIFCIIQRRKRHDDDIELLEIDTKPYIFNYSELKNATNDFNLENKLGEGGFGPVYKGTLNDGRDIAVKQLSVGSRHGKSQFATEITTILAVQHRNLVKLYGCCIEGSKKLLVYEYLENKSLDQALFGNRLTLNWSTRYDICLGVARGLTYLHEESRLRIVHRDVKASNILLDCDLIPKLSDFGLAKLYDDKMTHMSTRVAGTIGYLAPEYAMRGHLTEKADVFSFGIVALEVVSGRSNSCSSLEGEKVYLLEWAWQLHENNLITDLVDPRISEFNEEEVKCIVGIVLLCTQASPALRPSMSRVVGMLSKDIEVSTVTTKPGYLTDWTFEDVTNLMTNIEIKGSDKSYQNPSASTSIVSRVDLSPISASKPILNKTLDEVW 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0785 1002 Gene3D Transferase(Phosphotransferase) domain 1 738 941 - -
Ssu9g0785 1002 Gene3D Ribonuclease Inhibitor 73 205 IPR032675 -
Ssu9g0785 1002 PANTHER BNAA08G00070D PROTEIN 252 998 - -
Ssu9g0785 1002 PANTHER BNAA08G00070D PROTEIN 109 248 - -
Ssu9g0785 1002 SUPERFAMILY L domain-like 78 356 - -
Ssu9g0785 1002 ProSiteProfiles Protein kinase domain profile. 662 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0785 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Ssu9g0785 1002 SMART serkin_6 662 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0785 1002 Gene3D Ribonuclease Inhibitor 206 257 IPR032675 -
Ssu9g0785 1002 SUPERFAMILY Protein kinase-like (PK-like) 645 947 IPR011009 -
Ssu9g0785 1002 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 109 248 - -
Ssu9g0785 1002 Pfam Protein tyrosine and serine/threonine kinase 663 928 IPR001245 GO:0004672|GO:0006468
Ssu9g0785 1002 Gene3D Ribonuclease Inhibitor 258 371 IPR032675 -
Ssu9g0785 1002 Pfam Malectin domain 405 589 IPR021720 -
Ssu9g0785 1002 Gene3D Phosphorylase Kinase; domain 1 624 737 - -
Ssu9g0785 1002 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Ssu9g0785 1002 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Ssu9g0785 1002 Gene3D - 403 594 - -
Ssu9g0785 1002 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 252 998 - -
Ssu9g0785 1002 CDD STKc_IRAK 668 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0785 Ssu-Chr9 34538001 34613968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0785 110 188 Receptor kinase-like Gene Family AT1G56120 36.709 2.42e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu9g0785 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0785 - - gmx:100798233 1496.1