Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g0761 | ATGACGAGTGCGATCCTCAGAAGATCCTCTTCCGCATTCTCGCGCCGCTTCTTCGCCGCTCTCACCGCCGTCGAGCCAATCCCGCACCACCGCCGCTGGCTCGCCGCCCTTCGGCACGGGGTCTCCGGCGACGTAGCCCGAGCCTTTCACGCGAAATCCGGGCCGCTGAGTTTCCGCTCGTCGCCGGTGTCTCGTGCGGCGCAGTTTGCCGTGGAGCGCGATTACTCCAACGACGACGAAGGCTGCGGCGCGAACCGCGACGAAGGACTCGAGATCGCGAAGCTCGGGATCTCGCCGGAGATCGTGGACGCTCTCGCCAAGAAAGGGATCGCGAAGCTGTTCCCCATTCAGagAGCTGTGCTGGAACCTGCGATGCAAGGACGTGATATGATTGGTCGAGCTAGAACTGGAACTGGGAAAACTCTTGCTTTTGGGATACCCATCTTGGACAGGATCATTCAGTTTAATGCTAAGCATGGGCGAGGAAAGGATCCCGTGGCTTTGGTTTTGGCTCCGACTAGAGAACTTGCACGGCAGGTTGAGAAGGAATTCAATGAAGCTGCACCTAACTTGGACATGATCTGTCTTTATGGGGGTATGCCCATCCAGCAACAAATGAGGCAGCTGAATTATGGTGTGGATATTGCAGTAGGCACGCCTGGTCGAATTATTGATCTTCTCAACAGGGGTTCACTGAATTTGAAGGATGTTCAGTTTGTTGTTCTTGATGAAGCAGATCAGATGCTTCAAGTAGGATTTCAAGAAGCTGTGGAGAAGATCTTGGAGAGGTTGTCTCCAAATCGTCAGACTCTTATGTTCTCAGCAACAATGCCATCTTGGATAAAGAATATTACCCGCAATTACCTAAACAACCCCCTAACCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCGCTGTACTCTATTGTGTCTGATGCGTACACTAGAGCAGGAATTCTTGCACCTCTGATAACAGAACATGCAAATGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGATTATCGTATATGATGGCAAAAAGCCTTAAATGTGAGGCCTTGCATGGAGATATTTCGCAAACTCAGAGGGAAAGAACTCTTGCTGGCTTCAGAAACaacaattttaatgttttagtgGCAACTGATGTTGCTTCACGTGGGCTTGATATTCCCAATGTTGATCTTGTAATACATTATGATCTTCCCAATTCATCAGAGATATTTGTTCATCGATCTGGACGGACGGGCCGTGCTGGGAAGAAAGGAATTGCTATTCTTGTTTACACAGATAACCAATCCCAGGCTGTGAAGACTATTGAGCGTGATGTTGGATGCAAATTTACAGAGCTACCAAAGATTGATGTTCAAGGTGGATCAGCAGAGATGTTTGGTGGCAAGAGTGGTGGTCGATTTGGCCCTTTAGGTGGTATGAAGGATCGTCAATCTGGAGGTACAGGTTTTGGTCGCAGTCCTGGATTTGGCCGTTCTGGGAGTTACAGTAACTCTGGATTTGGCCGTTCTGGCTATGGGAATTCGAGTGAGATGGGAAGGTTTGGTGGACCAAATTCTAGCCGTTTTGGTGGCCTTGGTTCGAGTCAATTAGGAGGGGGGTTTGGAGGATCTTCTGGTAATTCTTCTAGGGAAATGGGTAGATATGGTGGACCAAGCTCTGGTCATTATGGTTCCTATGGCGGTTTTGGAGATTTTGGACCGGGTCAGTCTGGTGCATTTGGTGACAGAAAGTCAAGCCAAACCAGCACCTTTGGTGGTAATTCACGTGGTAGTGGTTTCGATGCTTTTGGGGATAACCCAAATAATGACAGTTACAATAGAGGAAAGTCGTTTTAA | 1878 | 0.4814 | MTSAILRRSSSAFSRRFFAALTAVEPIPHHRRWLAALRHGVSGDVARAFHAKSGPLSFRSSPVSRAAQFAVERDYSNDDEGCGANRDEGLEIAKLGISPEIVDALAKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDRIIQFNAKHGRGKDPVALVLAPTRELARQVEKEFNEAAPNLDMICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRGSLNLKDVQFVVLDEADQMLQVGFQEAVEKILERLSPNRQTLMFSATMPSWIKNITRNYLNNPLTIDLVGDSDQKLADGISLYSIVSDAYTRAGILAPLITEHANGGKCIVFTQTKRDADRLSYMMAKSLKCEALHGDISQTQRERTLAGFRNNNFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIFVHRSGRTGRAGKKGIAILVYTDNQSQAVKTIERDVGCKFTELPKIDVQGGSAEMFGGKSGGRFGPLGGMKDRQSGGTGFGRSPGFGRSGSYSNSGFGRSGYGNSSEMGRFGGPNSSRFGGLGSSQLGGGFGGSSGNSSREMGRYGGPSSGHYGSYGGFGDFGPGQSGAFGDRKSSQTSTFGGNSRGSGFDAFGDNPNNDSYNRGKSF | 625 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g0761 | 625 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN | 3 | 553 | - | - | |
Ssu9g0761 | 625 | MobiDBLite | consensus disorder prediction | 587 | 625 | - | - | |
Ssu9g0761 | 625 | SMART | ultradead3 | 109 | 312 | IPR014001 | - | |
Ssu9g0761 | 625 | MobiDBLite | consensus disorder prediction | 504 | 519 | - | - | |
Ssu9g0761 | 625 | Gene3D | - | 91 | 299 | IPR027417 | - | |
Ssu9g0761 | 625 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 324 | 468 | IPR001650 | - | |
Ssu9g0761 | 625 | CDD | SF2_C_DEAD | 309 | 438 | - | - | |
Ssu9g0761 | 625 | SMART | helicmild6 | 349 | 429 | IPR001650 | - | |
Ssu9g0761 | 625 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 121 | 295 | IPR014001 | - | |
Ssu9g0761 | 625 | Pfam | DEAD/DEAH box helicase | 114 | 283 | IPR011545 | GO:0003676|GO:0005524 | |
Ssu9g0761 | 625 | CDD | DEADc | 101 | 296 | - | - | |
Ssu9g0761 | 625 | Pfam | Helicase conserved C-terminal domain | 325 | 429 | IPR001650 | - | |
Ssu9g0761 | 625 | PANTHER | RNA HELICASE | 3 | 553 | - | - | |
Ssu9g0761 | 625 | MobiDBLite | consensus disorder prediction | 474 | 625 | - | - | |
Ssu9g0761 | 625 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 164 | 449 | IPR027417 | - | |
Ssu9g0761 | 625 | MobiDBLite | consensus disorder prediction | 535 | 561 | - | - | |
Ssu9g0761 | 625 | Gene3D | - | 320 | 470 | IPR027417 | - | |
Ssu9g0761 | 625 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 90 | 118 | IPR014014 | GO:0003724 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g0761 | Ssu-Chr9 | 33499266 | 33505569 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g0761 | 78 | 461 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.378 | 4.72e-63 | 212 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g0761 | - | - | gmx:100815635 | 924.85 |