Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0760 ATGAAATGTTGTCATTCCTCTTTCACTCTCATAGTGTATTTGGTTCCTTTGATATCCTACTCCTCTAGACCAGTTTTCCCACAAATGGCAACCTTTCCTTCTTTCAGGTTTGTACCCTTGTGCGTGCTCTTCTTCCTTGTGTGCCTCACTACTCCTGCTTCTATTTCTTCACTTCCGCTTTCCTTGAGAAGGCAAGCTTCTATCCTTGTTTCTATGAAGCAAGATTTTGGGGCTGCTAACTCTTCTCTGAGAAGCTGGGACATGTCAAATTACTTGTCCCTTTGCAGTTGGCATGGCATTCAGTGTGACCATGACAACATGTCTGTGGTGTCACTTGACATATCCCATTTGAACACTTCTGGGTCACTTTCACCTGCCATCACAGGACTCTTGAGCCTTGAGAGTGTCTCCCTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGTGACATTCACAAGCTGCCAAGGCTGAGGTTCCTCAACATGTCCACCAACATGTTCAGTGGGAACTTGAGTTGGCAATTCTCCCAGCTTAAGGAGCTTCAAGTGCTGGATGCCTACGACAACGCTTTCAATGGCTCACTTCCTCAGGGTGTCACTGATCTTCCAAAGATAAAGCACTTGAACTTCGGAGGGAACTACTTCTCTGGGAAAATCCCTCCAAGCTATGGAAACATGGGGCAGCTCAACTTTCTGTCCCTTGCAGGGAATGATTTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTCACTAACCTGACTCATCTTTACTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGCTGACCAATTTGGTTCATCTAGACATTGCAAACTGTGGCTTGACAGGCGCAATTCCTTCTGAGTTGGGAAACTTCTCCAAGTTAGACACTCTCTTCTTGCAAACCAATCAGTTCAGTGGTTCAATCCCTCCCCAGCTAGGAAACTTGACGAGCTTGAAAGCTCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTTATGAGTTCTCAGCCCTTCATGAGCTTACCCTCTTGAACTTGTTTATAAACAAGTTGCATGGAGAAATTCCTCACTTCATTGCTGAGCTACCTAAATTGGAGACTCTGAAGCTTTGGCAGAACAACTTCACTGGAGTGATTCCTTCCGATCTTGGCCAGAATGGCAGATTGGTTGAGCTTGACTTGTCAACAAATAAGCTCACTGGTTTGGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTGCAAATTTTGATCCTGCTGAAAAACTTCCTGTTTGGCTCTTTGCCTGATGAACTTGGTCAATGCCACACACTCCAAAAAGTCCGTTTGGGTCAGAACTATTTAACTGGGCCACTTCCACATGAGTTTCTTTATTTGCCTGAGCTATACCTTGTGGAGCTACAGAACAATTATCTTAGTGGTGGCTTTCCACAATCAACTAGCAACACACCCTCCAAACTAGCACAGTTGAACCTATCAAACAACCGGTTCTCAGGGTCTCTTCCAACCTCAATTGCAAATTTTCCAAACTTGCAAATTCTTCTGCTTAGTGGAAACAGATTCTCAGGAGAAATCCCACCAGATATAGGGAGATTGAAAAGTATCCTCAAGTTGGATATAAGTACTAACAACTTTTCAGGTAGTATTCCACCTGAGATAGGTAACTGTGTCTTACTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATTCCAGTCCAAGTTGCTCAAATTCACATATTAAACTATCTCAATGTCTCATGGAACCACCTAAACCAAAGCCTTCCCAAGGAACTTAGGGCCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGTTCAATACCTGAGGGGGGGCAATTCTCAATCTTTAACTCTACATCCTTTGTTGGTAACCCTCAGCTATGTGGCTATGACTCCAAGCCATGCAACCTTTCTTCAACAGCTGTGTTGGGATCTCAAGAAAAAAGCAGTGCAAAACCTGGGGTCCCTGTGAAGTTCAAGTTCCTCTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTGCAACCTTGGCCATCATCAAGAGTAGAAAGACAAGGAGGCACTCCAATTCGTGGAAGTTAACAGCATTTCAAAAGCTGGAATATGGGAGTGAGGACATCATAGGGTGCATAAAGGAAAGCAATGTGATAGGAAGAGGTGGAGCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGGGAGGAAGTGGCAGTGAAGAAGCTGTTGGGAATCAACAAAGGCTCTTCCCATGACAATGGCCTCTCTGCAGAAATAAGGACACTGGGAAGAATCAGACACAGGTACATTGTGAGGTTGTTGGCATTTTGTTCAAACAGAGAGACCAATTTGCTTGTCTATGATTACATGCCAAATGGAAGCTTGGGGGAAGTCTTGCATGGAAAGAGGGGTGAGTTTCTCAAGTGGAACACTAGGCTCAAAATAGCCACAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTTTGATCATCCATAGAGATGTCAAGTCCAATAACATATTGTTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCATGCAAGGTAATGGGGCATCAGAGTGCATGTCTTCCATTGCTGGTTCCTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTGGAACTCATAACGGGGCGAAGGCCAGTGGGGGATTTTGGGGAAGAAGGATTAGACATTGTTCAATGGACCAAGATGCAAACCAATTGGAACAAAGAGACGGTGATGAAGATCCTTGATGAGAGGCTACATCACATTCCTTTAGCTGAAGCAAAGGAGGTGTTTTTTGTGGCAATGTTGTGTGTTCATGAGCACAGTGTGGAGCGACCAACCATGAGAGAAGTGGTTGAAATGCTTGCACAAGCAAAGCAACCAAATACATTTCAAATGCAGTGA 3054 0.4437 MKCCHSSFTLIVYLVPLISYSSRPVFPQMATFPSFRFVPLCVLFFLVCLTTPASISSLPLSLRRQASILVSMKQDFGAANSSLRSWDMSNYLSLCSWHGIQCDHDNMSVVSLDISHLNTSGSLSPAITGLLSLESVSLQGNGFSGEFPSDIHKLPRLRFLNMSTNMFSGNLSWQFSQLKELQVLDAYDNAFNGSLPQGVTDLPKIKHLNFGGNYFSGKIPPSYGNMGQLNFLSLAGNDLRGFIPSELGNLTNLTHLYLGYYNQFDGGIPPQFGKLTNLVHLDIANCGLTGAIPSELGNFSKLDTLFLQTNQFSGSIPPQLGNLTSLKALDLSFNMLTGGIPYEFSALHELTLLNLFINKLHGEIPHFIAELPKLETLKLWQNNFTGVIPSDLGQNGRLVELDLSTNKLTGLVPKSLCLGKRLQILILLKNFLFGSLPDELGQCHTLQKVRLGQNYLTGPLPHEFLYLPELYLVELQNNYLSGGFPQSTSNTPSKLAQLNLSNNRFSGSLPTSIANFPNLQILLLSGNRFSGEIPPDIGRLKSILKLDISTNNFSGSIPPEIGNCVLLTYLDLSQNQLSGPIPVQVAQIHILNYLNVSWNHLNQSLPKELRAMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVGNPQLCGYDSKPCNLSSTAVLGSQEKSSAKPGVPVKFKFLFALALLGCSLVFATLAIIKSRKTRRHSNSWKLTAFQKLEYGSEDIIGCIKESNVIGRGGAGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWNTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQGNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNWNKETVMKILDERLHHIPLAEAKEVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPNTFQMQ 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0760 1017 ProSiteProfiles Protein kinase domain profile. 733 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0760 1017 Pfam Protein tyrosine and serine/threonine kinase 735 1005 IPR001245 GO:0004672|GO:0006468
Ssu9g0760 1017 Pfam Leucine rich repeat 468 529 IPR001611 GO:0005515
Ssu9g0760 1017 PANTHER UNNAMED PRODUCT 41 1014 - -
Ssu9g0760 1017 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 41 1014 - -
Ssu9g0760 1017 SMART serkin_6 733 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0760 1017 Pfam Leucine rich repeat N-terminal domain 65 103 IPR013210 -
Ssu9g0760 1017 SMART LRR_typ_2 396 418 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 323 354 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 226 250 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 371 395 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 275 299 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 516 540 IPR003591 -
Ssu9g0760 1017 SMART LRR_typ_2 178 202 IPR003591 -
Ssu9g0760 1017 SUPERFAMILY Protein kinase-like (PK-like) 727 1005 IPR011009 -
Ssu9g0760 1017 SUPERFAMILY RNI-like 111 449 - -
Ssu9g0760 1017 Gene3D Ribonuclease Inhibitor 64 172 IPR032675 -
Ssu9g0760 1017 Gene3D Ribonuclease Inhibitor 367 664 IPR032675 -
Ssu9g0760 1017 Gene3D Phosphorylase Kinase; domain 1 702 810 - -
Ssu9g0760 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Ssu9g0760 1017 Gene3D Ribonuclease Inhibitor 265 366 IPR032675 -
Ssu9g0760 1017 Gene3D Ribonuclease Inhibitor 173 264 IPR032675 -
Ssu9g0760 1017 Gene3D Transferase(Phosphotransferase) domain 1 811 1017 - -
Ssu9g0760 1017 SUPERFAMILY L domain-like 338 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0760 Ssu-Chr9 33445412 33449860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0760 56 1007 Receptor kinase-like Gene Family AT5G65700 57.456 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ssu9g0760 PK_Tyr_Ser-Thr 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0760 - - gmx:100803075 1829.3