Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0755 ATGGAACAAAGTGGTGGAATGATAACTGGGTCGCATGAAAGGAATGAACTTGTTAGAGTTAGACACGGTTCTGATAGTGGGTCTAAACCCTTGAAGAATTTGAATGGTCAGATTTGTCAACTATGTGGTGATACTGTTGGATTAACAGCCACTGGTGATGTCTTTGTTGCTTGCCATGAGTGTGGCTTCCCACTTTGTCATTCTTGTTACGAGTATGAGCGGAAAAATGTGAGGCAATCTTGTCCACAGTGCAAGACTAGATACAAAAGTCACCAAGATGGTGCTCAAGTGGAGggagatgatgatgaagacGATGCTGATGATCTGGACAATGAGATCAACTATGGCCAAGGAAACAATTCCAAGGCAGGGATGCAATGGGAAGAAGATGCTGACCTCTCTTCGTCTTCTGGACATGATTCTCAAATACCAAATCCCCATCTAGCAAATGGGCAACCGATGTCTGGTGAGATTCCATGTGCTACTTCTGATGCTCAATCTATGCAAACTACATCAGGTCCTATGGGTCAATCCGAAAACCTTCACTCACTTCCCTATGTTGATCCAAAGCAACCAGGTCCTGAGAGTGATGAAGAGATAAGAAGAGTGCCGGAGATCGGAGGTGAAAGTGCTGGAACTTCAGGCTCTCGGCCAGATGCCGGTTCAACTGCTGGTCCGGAACGTGTTCAGGGGACAGGAGAGGGTCAAAGGAAGAGAGGGAGAAGCCCGGCTGATAAAGAAAGCAAGCGGCTAAAGagGCTACTGAGGAACAGAGTTTCAGCTCAACAAGCAAGGGAGAGGAAGAAGGCATACTTGATTGATTTGGAAACAAGAGTCAAAGACTTAGAGAAGAAGAATTCAGAACTCACAGAAAGACTTTCCACTTTGCAGAATGAGAATCAAATGCTTAGACAAATACTGAAGAACACAACAGCGAGCAGGAGAGGGAGCAATAGTGGTACCAATAATGCTGAATGA 978 0.4438 MEQSGGMITGSHERNELVRVRHGSDSGSKPLKNLNGQICQLCGDTVGLTATGDVFVACHECGFPLCHSCYEYERKNVRQSCPQCKTRYKSHQDGAQVEGDDDEDDADDLDNEINYGQGNNSKAGMQWEEDADLSSSSGHDSQIPNPHLANGQPMSGEIPCATSDAQSMQTTSGPMGQSENLHSLPYVDPKQPGPESDEEIRRVPEIGGESAGTSGSRPDAGSTAGPERVQGTGEGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELTERLSTLQNENQMLRQILKNTTASRRGSNSGTNNAE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0755 325 MobiDBLite consensus disorder prediction 97 111 - -
Ssu9g0755 325 MobiDBLite consensus disorder prediction 113 149 - -
Ssu9g0755 325 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 157 317 - -
Ssu9g0755 325 MobiDBLite consensus disorder prediction 88 269 - -
Ssu9g0755 325 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Ssu9g0755 325 MobiDBLite consensus disorder prediction 232 269 - -
Ssu9g0755 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Ssu9g0755 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Ssu9g0755 325 Pfam bZIP transcription factor 246 307 IPR004827 GO:0003700|GO:0006355
Ssu9g0755 325 SMART brlzneu 245 309 IPR004827 GO:0003700|GO:0006355
Ssu9g0755 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 310 IPR004827 GO:0003700|GO:0006355
Ssu9g0755 325 Gene3D Single helix bin 268 309 - -
Ssu9g0755 325 SUPERFAMILY Leucine zipper domain 249 307 IPR046347 GO:0003700|GO:0006355
Ssu9g0755 325 SUPERFAMILY RING/U-box 23 111 - -
Ssu9g0755 325 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
Ssu9g0755 325 CDD bZIP_HY5-like 250 301 - -
Ssu9g0755 325 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 157 317 IPR044280 GO:0000981|GO:0045944
Ssu9g0755 325 MobiDBLite consensus disorder prediction 156 179 - -
Ssu9g0755 325 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Ssu9g0755 325 Coils Coil 244 313 - -
Ssu9g0755 325 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0755 Ssu-Chr9 33342404 33345586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0755 1 194 Glycosyltransferase AT4G32410 60.513 5.13e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu9g0755 zf-UDP 2.5e-38 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0755 K10999 - gmx:548004 576.244