Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0737 ATGACAAACAATTCCATGGCAATCTCCCTCTCCCACAACTCCCCTTCCTCGGACTCCGAATCCGGGTCCTCCTCGGACCACCGGGCCGGCTCCTCCTCCCAGCGCCACCGTCCACCGCCGCCACCCCCGGCCACAAACCAACCCCCGGAGCAACTCCCCCTCGCGACCCCGCCCAACAAGAAGCCACGTGGCAGGCCCCCGGGCTCCAAGAACAAGCCCAAGCCCGCTCCACTCCCCTTGGCCCAGCCCGCCGACCCCAACGTGAGGCTCGTCATAGTTGACGTGCCCCCGGGGAGCGACGTCATGGAGTCCATCTTTGACGTCGCTCGCCGGGACCACGTCAGCGTGACGATCCTCAGCGCGACCGGCATGATCGCCAGCGTCACGCTCCGCAACACGCCCCACGGCGCGCCCGCGGTCACACTTCATGGGCCCTTCACCCTCCTCTCGTTCACCGGCTCCTACATATACAACAACCAATACACCCTCCGCGCGGGGGCCACCCCGCCCCCGCCCCTCTCCTTCGGAATCAACCTCTCCACCTCCCAGGGCCAGGTATTCGGCGGCACCATCGGCGGCAGAGTCGTCGCCGGCAACGACGTCACCCTCGTCGCCTCCACCTTCAGgttcaTGACGGTGGTTTTGAGAATTCTTGTTGAGGGCTTGGATGGTGCAGGTGGTGAAAATTGA 690 0.6507 MTNNSMAISLSHNSPSSDSESGSSSDHRAGSSSQRHRPPPPPPATNQPPEQLPLATPPNKKPRGRPPGSKNKPKPAPLPLAQPADPNVRLVIVDVPPGSDVMESIFDVARRDHVSVTILSATGMIASVTLRNTPHGAPAVTLHGPFTLLSFTGSYIYNNQYTLRAGATPPPPLSFGINLSTSQGQVFGGTIGGRVVAGNDVTLVASTFRFMTVVLRILVEGLDGAGGEN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0737 229 Gene3D - 87 217 - -
Ssu9g0737 229 MobiDBLite consensus disorder prediction 1 83 - -
Ssu9g0737 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 22 209 - -
Ssu9g0737 229 CDD DUF296 89 198 IPR005175 -
Ssu9g0737 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 209 IPR014476 GO:0003680
Ssu9g0737 229 MobiDBLite consensus disorder prediction 35 82 - -
Ssu9g0737 229 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 208 IPR005175 -
Ssu9g0737 229 ProSiteProfiles PPC domain profile profile. 84 229 IPR005175 -
Ssu9g0737 229 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 208 - -
Ssu9g0737 229 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0737 Ssu-Chr9 32298483 32299784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0737 60 208 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.875 3.05e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0737 - - gmx:100818645 233.032