Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0734 ATGGCATCCTGCTTGAAGCCACCTAGGCTATCTAGCAATGAAGATGACTCAGTGATACTCTTTTCAACTTCTAACTCTCCTGAAGAGTCCATTAGTCCTTCTTCCTCTTTCCACcattcaccaccaccatcactacatCAATCTAGTACTGCATACAAACTCTCTGTGAGAAATCTCTCCTACACTTTGCACCCTCATAAGACCACTCCCTTTTCATTTTGTCGACTGACTCAAAAACCAAAGCCTGTAAATATACTCAAGTCAGTCTCTTTTGTTGCCAGAAGTTCTGAGattgttgctgttgttggtCCTAGTGGCACAGGAAAGTCTACCCTTCTGCGAATCATTGCCGGGAGGGTAAAAGATGAAGATTTTGATCCGAAAAGTGTCTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGGAAGATATGTGGCTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTAACTGTGAAAGAAATTTTGTTGTTTAGTGCCAAGTTTAGGCTAAAAGAAATGACAGCAAAGGATAGAGAGTTGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGCCTTTTTCATGTTGCTGATAGTTTTGTTGGGGATGAAGAGAATAGAGGGATATCTGGTGGAGAGAGGAAAAGGGTCTCAATTGGAGTTGATATGATTCACAATCCTCCAATTTTGCTCCTAGATGAACCAACATCAGGTCTGGATAGTACTTCAGCTTTGCAAGTCATAGAGCTTCTGTCATCAATTGTTAAAGCAAAGCAAAGGACAGTGGTTCTTTCAATCCACCAACCCAGCTATAGAATATTGCAGTATATTTCCAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTTCACAATGGTAGCCTAGAACTGCTAGAGGAAACCATAAGTAAATTGGGATTTCAAATTCCAACACAACTGAATGCTTTAGAATTCTCCATGGAAATTATACACGGGTTGGAAGATTCCAGTTCCAAATATGACACTTGCACCATTGAGGAAAAGGAGTCATTTCCAAACCTCATGTGGCCAGAGGAAGAAAACTGTGGAGCCCAATCACAATGTAACAGGGAAAGTCTTGGCAGTCTTTGTTATGCAAACTTGATTGAGATATTGATTCTCTGCTCAAGATTTTGGAAGATCATTTATAGAACAAAGCAGCTTTTCCTGGCCAGAACAATGCAAGCACTAGTTGGTGGCTTTGGGCTAGGAAGTGTTTATGTAAAGGTAAGAAGGGATGAAGGAGGAGTTGCAGAAAGGTTAGGTCTATTTGCATTTAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGTGTACTGATGAAAGAAGCGTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTGTCTTccttcctttcttgtttgtaGTATCTATACTATTTGCTGTTCCTGTGTATTGGATTGTAGGACTCAATCCTTCCCTTTCTGCCTTCACCTTCTTCACTTTTGTGGTTTGGCTCATTGTGCTCATGGCAAGTTCTCTAGTGCTCTTCTTAAGTGCAGTCTCTCCTGATTTCATTTCAGGGAACTCCCTCATCTGCACAGTTCTTGGagccttcttcctcttctctggATACTTCATCCCAAAGGAGAGCATCCCAAAGTACTGGCTTTTCATGTACTATGTGTCTCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTACTGGAATGTTAGAAATGAGTGTTTCTCACACCAAATAGAGGAGGGATCACAGTGTTTGATTACTGGGTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATAAATGTGGGAGTAATGCTAGGATTCTTTGTGCTGTATCGTGTGCTTTGTTGGATAATACTTGCACGAAAGGCCTCCAAGACAACCATATAG 1962 0.3976 MASCLKPPRLSSNEDDSVILFSTSNSPEESISPSSSFHHSPPPSLHQSSTAYKLSVRNLSYTLHPHKTTPFSFCRLTQKPKPVNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDEDFDPKSVSINDQPMTSPAQLRKICGFVAQEDNLLPMLTVKEILLFSAKFRLKEMTAKDRELRVESLLQELGLFHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKAKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLELLEETISKLGFQIPTQLNALEFSMEIIHGLEDSSSKYDTCTIEEKESFPNLMWPEEENCGAQSQCNRESLGSLCYANLIEILILCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYVKVRRDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFVFLPFLFVVSILFAVPVYWIVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRNECFSHQIEEGSQCLITGFDVLKSRGLERDNRWINVGVMLGFFVLYRVLCWIILARKASKTTI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0734 653 SMART AAA_5 95 297 IPR003593 -
Ssu9g0734 653 Pfam ABC transporter 86 239 IPR003439 GO:0005524
Ssu9g0734 653 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
Ssu9g0734 653 Pfam ABC-2 type transporter 378 586 IPR013525 GO:0016020|GO:0140359
Ssu9g0734 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 295 IPR027417 -
Ssu9g0734 653 Pfam ABC-2 type transporter 269 335 IPR043926 GO:0140359
Ssu9g0734 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 646 - -
Ssu9g0734 653 Gene3D - 72 321 IPR027417 -
Ssu9g0734 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 646 - -
Ssu9g0734 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 312 IPR003439 GO:0005524
Ssu9g0734 653 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0734 Ssu-Chr9 32236830 32238791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0734 83 299 Calmodulin-binding Proteins AT2G36910 30.493 8.53e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0734 K05681 - gmx:100783883 1140.56