Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0716 ATGACGATATTGGGTATGGGAGGCCTGGGCAAAACAACCCTTGCTCAATGCCTTTATAATGATAGTGAAGTGCAAAAACATTTTGATTTGACAGCTTGGGCATGGGTGTCTGatgattttgatgtttttagGGTGACAAAGACAATTGTTGAATCTGTCACTTCTAAAAGTTGTTATAATGTTAATCTCGATGTTCTTCGTGTAGAGTTGAAGAACAGCTTGAAAGATAAAAGGTTTTTGCTTGTGCTTGATGACCTTTGGAATGAGAAGTATAATGATTGGCATCACCTAGTAGCACCTCTTAGCAGTGGGAAAAAGGGAAGTAAGATCATTGTGACAACCCGACAACAGAGAGTGGGACAAGTCACTCATACGTTTCCCATTTATGAGCTGAAACATTTAACAGATGAAAACTGTTGGTGTATACTTGCCAACCATGCATTTGGAAATGAAGGGGTTTATTACCAACCTGGAACACGCTTGAATAATTACAACTTCAATTCATATATTGGTGCTGACTTTACTTTGTCTCAGAATGAAGTAATCAATGCATCTTCAGTTGGCTTCTTGTTGGTAAAGTGGAGTATagaatga 594 0.3721 MTILGMGGLGKTTLAQCLYNDSEVQKHFDLTAWAWVSDDFDVFRVTKTIVESVTSKSCYNVNLDVLRVELKNSLKDKRFLLVLDDLWNEKYNDWHHLVAPLSSGKKGSKIIVTTRQQRVGQVTHTFPIYELKHLTDENCWCILANHAFGNEGVYYQPGTRLNNYNFNSYIGADFTLSQNEVINASSVGFLLVKWSIE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0716 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 151 IPR027417 -
Ssu9g0716 197 PANTHER - 1 154 - -
Ssu9g0716 197 PANTHER DISEASE RESISTANCE PROTEIN RP 1 154 IPR044974 GO:0006952
Ssu9g0716 197 Gene3D - 1 126 IPR027417 -
Ssu9g0716 197 Pfam NB-ARC domain 1 150 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0716 Ssu-Chr9 31975640 31979365 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0716 3 134 WRKY Transcription Factor Family AT4G12020 26.897 3.06e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0716 - - ccaj:109804942 275.018