Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0713 ATGGCGGAAATCGCAGTATCCTTGGCATTAGACAAATTGCTTCCACTAATACGAGATGAAGCAAATCTGCTACGGGGCATCCCCGGAGAATTTGAAGACATACAGAAAGAACTAGAATACATTCAAGGCTCCCTTGAGAGTGCAGATAGAAGGGCCGCAGAAGAAGGAGACAACACAAACAAGGGAATCAAAACATGGGTGAAAGAGTTGAGGGAAGCATCTTTTCGCATAGAAGATGTCATTGATGAATACATGATCTATGTGGAACAACAGCCACGTGATCATGGATGTGCAACTTCACTCCATAAGGCCATTCACTTTATTAAAACTTTGATGCGTCGGCATCGACTAGCATCAGAGATTCAGCAGATCAATTCACTTGTTCGTGGAATCAAGCAAAGAGGTGTAGATTATCACTTCCTAATCCATCCTTCCCCTGAACAAGGACCAAGCAGCTACCGAGGCAGCCATAGTGTCCAATGGCATGATCCGCGATTGCGTTCCCGTTACCTTGAAGAAGCTGAAGTTGTTGGCATTGAAGTCCCAAGAGATAAATTGATTGGTTGGTTAGTGGAGGGACCGGCAGAGCGCAGTGTCATCTCTGTGATAGGAATGGGAGGGCTAGGAAAAACCACTCTTGTCAGCAGAGTTTTCAACAACCAGAAGGTGATTGCACACTTTGACTACCACGCATGGATCACAGTGTCTCAATCCTACACTGTGGAAGGATTGCTGAGAGACTTGTTGAAGAAGTTATGCAGAGAAAAAAGGGTGGATCCTCCTCAAGGTATTTCTGAAATGGATCGAGATTCATTGATTGATGAAGtcagaaattattttcaacaaaagaGGTACGTTGTAGTTTTTGATGATGTATGGAGTCTACCATTTTGGGGCCAGATTAAAAATGCCATGCTTGATAATAAAAATGGAAGTAGAATATTAATCACAACTAGGATGGATGGTGTTGTAGAGTCTTGTAAGAACTCTCGTTCTGATAAGGTGCATGAGCTGAAACCTTTAACTCAAGAAGAATCTATGGAACTCTTTTGCAAGAAGGTATTCCAGTGTCACAATTGTCCAGAAGAACTCAAGAAAATTTCTTCTTACTTTGTTGAAAAATGTAATGGTTTACCATTAGCAATTGTGGCTATTGGTGGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATGGGAAAAAATTAGGCGAAGCCTAAGTTCAGAGATGGACAAAAATCCCCATTTAATTGGTATAACAAAGATTTTAGGTTTCAGTTATGATGATTTGCCATACTATCTAAAATCATGCTTCTTGTATTTTGGAATATATCCTGAAGACTATGAAGTTAGATCAGCAAGACTAATTCGGCAGTGGATAGCTGAGGGATTTGTAaaagatgaagaaggaaaaactTTAGAGGACAGTGCACAACAATATTTAACAGAGTTGATTGGTAGAAGTTTAGTGCAAGTCTCTTCATTCACCATAGATGGCAGAGCTAAGAGTTGTCATGTTCATGACTTATTACACGATGTGGTCCTTAGAAAATTCAAGGATTTCAGTTTCTGCCAGCATATTAAAGAAGATGAGTCGATATCAAGTGGGATGATTAGGCGCTTGTCAATAGCAACCATATCCAATGATTTAATCAGGAGTACAGAAAGCTCACACACCCGGTCACTGCTTGTTTTTGCAGGTTATAAAGAATCAGCGTTAAAGAACAACTTTGTGCAAAGAATCCCTACCAAATACAGGTTATTGAAGGTACTTGATTTTGAGGATAGTCCATTGAGTTTTGTTCCTATAAGTTGGGGAAATTTTGCACACTTGAAGTATTTAAACATAAGAAATTCAAAGATGCATACTCAGCAGCTTCCAGAATTCATTGGCAAACTCCAGAACGTTGAGACCTTGGACTTAAGGAGAACAGGGGTCACACAAATGCCAAAGGAGATTTGCAAGCTTAGAAAGCTACGTcatcttttggtttttgatCTGCTATTGTTTCCATTGAAGAATGGTGAAAGTTTGTATTTTCAAGATGGAGGGTTTCAGCAACTAAGGGAACTATCTCTCGGTCCCCTTTATAACTTGAAATCCATCATTATCGATAAAGGAGCACTCCATTCTTTGGGAAAGCTTGCACTTCAGCATATGCCCGAACTTAAGACAGTACCTGCTGGCATCCAACACTTGGAAAAACTTGCAGTGCTCGATATAAATGGTATGTCAACTGAATTCAACGAGTGCATTGCTCCCGTTGGAGAACCGGAGCACCCAATCATCCAGCATATGCCCCTTGTAAACATTGTTGGACGTACTGTTTGCCACTCAAGACATTAG 2346 0.3968 MAEIAVSLALDKLLPLIRDEANLLRGIPGEFEDIQKELEYIQGSLESADRRAAEEGDNTNKGIKTWVKELREASFRIEDVIDEYMIYVEQQPRDHGCATSLHKAIHFIKTLMRRHRLASEIQQINSLVRGIKQRGVDYHFLIHPSPEQGPSSYRGSHSVQWHDPRLRSRYLEEAEVVGIEVPRDKLIGWLVEGPAERSVISVIGMGGLGKTTLVSRVFNNQKVIAHFDYHAWITVSQSYTVEGLLRDLLKKLCREKRVDPPQGISEMDRDSLIDEVRNYFQQKRYVVVFDDVWSLPFWGQIKNAMLDNKNGSRILITTRMDGVVESCKNSRSDKVHELKPLTQEESMELFCKKVFQCHNCPEELKKISSYFVEKCNGLPLAIVAIGGLLSGKEKTPFEWEKIRRSLSSEMDKNPHLIGITKILGFSYDDLPYYLKSCFLYFGIYPEDYEVRSARLIRQWIAEGFVKDEEGKTLEDSAQQYLTELIGRSLVQVSSFTIDGRAKSCHVHDLLHDVVLRKFKDFSFCQHIKEDESISSGMIRRLSIATISNDLIRSTESSHTRSLLVFAGYKESALKNNFVQRIPTKYRLLKVLDFEDSPLSFVPISWGNFAHLKYLNIRNSKMHTQQLPEFIGKLQNVETLDLRRTGVTQMPKEICKLRKLRHLLVFDLLLFPLKNGESLYFQDGGFQQLRELSLGPLYNLKSIIIDKGALHSLGKLALQHMPELKTVPAGIQHLEKLAVLDINGMSTEFNECIAPVGEPEHPIIQHMPLVNIVGRTVCHSRH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0713 781 Gene3D - 164 334 IPR027417 -
Ssu9g0713 781 PANTHER DISEASE RESISTANCE PROTEIN RP 11 665 IPR044974 GO:0006952
Ssu9g0713 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 441 IPR027417 -
Ssu9g0713 781 Gene3D Ribonuclease Inhibitor 567 755 IPR032675 -
Ssu9g0713 781 Pfam Rx N-terminal domain 5 93 IPR041118 -
Ssu9g0713 781 Gene3D - 340 426 IPR042197 -
Ssu9g0713 781 PANTHER - 11 665 - -
Ssu9g0713 781 Gene3D - 4 118 - -
Ssu9g0713 781 PRINTS Disease resistance protein signature 279 293 - -
Ssu9g0713 781 PRINTS Disease resistance protein signature 375 389 - -
Ssu9g0713 781 PRINTS Disease resistance protein signature 731 747 - -
Ssu9g0713 781 PRINTS Disease resistance protein signature 199 214 - -
Ssu9g0713 781 SUPERFAMILY L domain-like 506 743 - -
Ssu9g0713 781 CDD RX-CC_like 2 132 IPR038005 -
Ssu9g0713 781 Pfam NB-ARC domain 183 428 IPR002182 GO:0043531
Ssu9g0713 781 Gene3D - 427 518 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0713 Ssu-Chr9 31924993 31927767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0713 194 745 WRKY Transcription Factor Family AT5G45050 24.053 1.63e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0713 K13457 - gmx:100789363 1005.74