Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0702 ATGGCGGAAACCGCAGTGTCCTTTGCACTAGACAAATTGCTTCCACTAATAAGAGATGAAGCCAATCTACTTTGGGACATCCCCAAAGAAtttaaagacataaaaaaagaacTAGAATACATTCGAGTCTTCCTGAAGGATGCAGATAGAAGGGCTACAGAAGAAGGAGACAACGCAAATGAGGGGATCAAAACATGGGTGAAGGAGTTGAGGGAAGCATCTTTTCGCATAGAAGATGTCATTGATGAATACATGATACTTATGGAAGAACAGCCTCATGATCGTGGATATCCAACTTCACTCCGTAACGTCATTCACTTTATCAAAACTTTGATGCATCGCCATCGAATAGCATCAGAGATTCAGCATATTAAGTCACTTGTTCGTGAAATCAAGCAAAGAGGTATAGATTATCACTTCCTAATCCAACCTTCTGTTGAACAAGAACCAAGCAACTACAGAGGTAGCGGAAGTGTCCAATGGTATGACCCTCGATTGCGTTCCCGTTACCTTGAAGAAGCTGAAGTTGTTGGCTTTGATGGCGCAAAAGATGAATTGATTGGTTGGTTAGGGGAGGGACAGGCAGAGCGCAGTGTCATCTCTGTGGTAGGAATGGGAGGGCAAGGAAAAACCACTCTTGTCAGCAAAGTTTTTAACAACCAGAAGGTGATTGCACACTTTGATTGCCATGCATGGATCACAGTGTCTCAATCCTACACTGTGGAAGGATTGCTAAGAGACTTGTTGAAGAATTTATACGAAGATGAAAAGAAGGATCCTCCTCCAGGTATTTCTGAAATGAATCGAGATTTATTGATTAATGCAGTGAGAAATTATTTGCAACAAAAGAGGTATGTTGTCGTTTTTGATGATGTATGGTGTGTAGAACTTTGGGGTCAGATTGAAAATGCCATGCTTGATAATAAAAATGGAAGTAGAATATTAATCACAACTAGGATGGATGGTGTTGTAGACTCTTGTAAGAACTCTCCTTTTGATCAGGTGCATAAGCTAGAACCTTTAACTGAAGAAGAATCTATGGAACTCTTTTGCAAGAAGGCATTCCAATGTCACAATAATGGACGTTGTCCAGAAGACCTCAGGAAAATTTCTTCTTACTTTGTTGAAAAATGTAAGGGTTTACCATTGGCAATTGTGGCTATTGGTGGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATgggaaaaaattagaagaagCCTAAGTTCAGAGATGGACAAAAATCCCCATTTGATTGGTATAACAAAGATTTTAGGTTTCAGTTATGGTGATTTGCCATACTATCTAAAATCATGCTTATTGTATTTTGGAATATATCCTGAAGACTATGAAGTTAAATCTAAAAGACTAATTCAGCAATGGATAGCTGAAGGATttgtaaaaaatgaagaaggaaaaactTTGGAGGACATTGCACAACAGTACTTAACAGAGTTGATCGGTAGAAGTTTAGTGCAAGTCTCTTCATTCAGCATAGATGGCAAAGCTAAGAGTTGTCGTGTTCATGACTTATTACACGATATGATCCTTAGAAAATTCGAGGATTTAAGTTTCTGCCAGCGTATCAGTAAGAAAGATGAGTTGATGTCAAGTGGGATGGTTCGGCGCTTGTCAATAGCAATCAATTCGGTTGATTTAATCTGGAGGACAAAAAGCTCACACACCCGGTCACTGTTTGTTTTTGCAGGTAAAGAATCAACATTAACCAGCAACTTTGTGCAAAGAATCCCTACAAAATACAGGCTATTGAAGGTACTTGATCTTCAAGATGGTCCATTGAGTTTTGTTCCTGAAAACTGGGGAAATCTAGTACACTtgaagtatttaaatttaagaaattcaaCGATGCCAACTGGACTTCTGAAATGCATTGGTAAGCTCCGCAACCTCGAGACCTTGGACATAAGGCATATAAATGTCAGGAGCACTTCCTTCTTTGGAAAAGCTCCAATTTTGGAATATACCCTGAACTCAAGGACAGTACCTGCTGGCATCCAACACTTGGAAAAACTTGAAGTTCTCAATATGTATGGTATGTCACTTAAATTCAAACTGCGCACTGCTCCCAATCGAGGATTAGATCATCCAGTCATCCAGCATGTGCCCCTTGTAAGAAATACCAGCGACCAGCGGTATTTTGCATTCCAGGCAGCCCTTATGTTCGTAAAAGCAGCAGAGGATTCGTCGGAAGCTATACGTGATTGA 2229 0.3867 MAETAVSFALDKLLPLIRDEANLLWDIPKEFKDIKKELEYIRVFLKDADRRATEEGDNANEGIKTWVKELREASFRIEDVIDEYMILMEEQPHDRGYPTSLRNVIHFIKTLMHRHRIASEIQHIKSLVREIKQRGIDYHFLIQPSVEQEPSNYRGSGSVQWYDPRLRSRYLEEAEVVGFDGAKDELIGWLGEGQAERSVISVVGMGGQGKTTLVSKVFNNQKVIAHFDCHAWITVSQSYTVEGLLRDLLKNLYEDEKKDPPPGISEMNRDLLINAVRNYLQQKRYVVVFDDVWCVELWGQIENAMLDNKNGSRILITTRMDGVVDSCKNSPFDQVHKLEPLTEEESMELFCKKAFQCHNNGRCPEDLRKISSYFVEKCKGLPLAIVAIGGLLSGKEKTPFEWEKIRRSLSSEMDKNPHLIGITKILGFSYGDLPYYLKSCLLYFGIYPEDYEVKSKRLIQQWIAEGFVKNEEGKTLEDIAQQYLTELIGRSLVQVSSFSIDGKAKSCRVHDLLHDMILRKFEDLSFCQRISKKDELMSSGMVRRLSIAINSVDLIWRTKSSHTRSLFVFAGKESTLTSNFVQRIPTKYRLLKVLDLQDGPLSFVPENWGNLVHLKYLNLRNSTMPTGLLKCIGKLRNLETLDIRHINVRSTSFFGKAPILEYTLNSRTVPAGIQHLEKLEVLNMYGMSLKFKLRTAPNRGLDHPVIQHVPLVRNTSDQRYFAFQAALMFVKAAEDSSEAIRD 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0702 742 Gene3D - 166 331 IPR027417 -
Ssu9g0702 742 Gene3D - 4 118 - -
Ssu9g0702 742 PANTHER - 16 685 - -
Ssu9g0702 742 PRINTS Disease resistance protein signature 378 392 - -
Ssu9g0702 742 PRINTS Disease resistance protein signature 633 649 - -
Ssu9g0702 742 PRINTS Disease resistance protein signature 199 214 - -
Ssu9g0702 742 PRINTS Disease resistance protein signature 279 293 - -
Ssu9g0702 742 SUPERFAMILY L domain-like 500 691 - -
Ssu9g0702 742 Gene3D - 430 519 IPR036388 -
Ssu9g0702 742 Pfam NB-ARC domain 182 430 IPR002182 GO:0043531
Ssu9g0702 742 PANTHER DISEASE RESISTANCE PROTEIN RP 16 685 IPR044974 GO:0006952
Ssu9g0702 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 444 IPR027417 -
Ssu9g0702 742 CDD RX-CC_like 2 132 IPR038005 -
Ssu9g0702 742 Gene3D - 340 429 IPR042197 -
Ssu9g0702 742 Pfam Rx N-terminal domain 5 92 IPR041118 -
Ssu9g0702 742 Gene3D Ribonuclease Inhibitor 520 699 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0702 Ssu-Chr9 31471032 31474704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0702 199 399 WRKY Transcription Factor Family AT5G45050 24.876 2.69e-08 55.8