Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0686 ATGACAGGGTCCAAACTCTCACAAGAAACTTGCGAAGCTGGAGCATACTTTATTTTGGGGAATCCCTTCTTTTGTATATCTCTTGCCCATAGGACCACATCATATGTGATGAACCTATACGTGGTTGAGAATATTAACAAAGATAGTACATGCACGCACTGCTCTTCTGTAGGTTTTCATGACATAGTTGCATCAGAGGAAGCCTATCACTTTATAATCCCTaagaatgaaaaggaaaatttagaAGAAGTAGATGCTTCAACAGATCAAAGCCACCTCTTGTATGGGATGATTCATTCTAGTGAGTATGGCCATCTGTTACATATCAATAGCACTAATGGAGGGTCAACATTTGTTAGAGGCAGAGAGATAATGGCACTGAAACTTGCAACAGAAGATCTTTCAAAGAAGATGTTTATGGATCTTCGGCTACTCAATGGAGTAGCATTTGGACACAACTGGTTCTTGAGTTGGGAATACAAGTATAACGAGCTCAAAGAAGTTTACAACAATGCGATGAAAACCTTGAGTTCGTTGGAACTTGATGTCATGAGATCCACCCTTAGTGACACCAAATTCAAAACGAAGATAAAGCACATGATTCGCTTCTACGTAGATTTGTCTAAGACTCGCATTATATCATTGAGGGATATTCTCTTATACATGCTTCACCTGAAAGACATTTATTCAGTGATCAAGACAAAAGTCAACACGAAGGAAAAATCAACTGATCTCATGGAATTGAGTACTATAATGTATGAAGCGGGGTGCAACACATGGTTTACAGAGACACTAGGGCTTGTGGCTCACAGTATTTTCAATACACTAAAAAAGTGCAGGGACAAAGGCATAGCTGAAAAGATGTCAAAGGAAGAAATTATACAGGCAGTTGCTCGGCAGCATAACGACAAAAACTTGGTTGTCTATGTTCTTGGGTTCCTTAACAATGTTATTATCGACGATTACATTATATGTCGAACCAGCGATGCAAGAACCAAAAAATCTGAACATGAATACACTGTTCGTGAACTCAGTGAATGTGAAATAGCCTCATATTAG 1059 0.3824 MTGSKLSQETCEAGAYFILGNPFFCISLAHRTTSYVMNLYVVENINKDSTCTHCSSVGFHDIVASEEAYHFIIPKNEKENLEEVDASTDQSHLLYGMIHSSEYGHLLHINSTNGGSTFVRGREIMALKLATEDLSKKMFMDLRLLNGVAFGHNWFLSWEYKYNELKEVYNNAMKTLSSLELDVMRSTLSDTKFKTKIKHMIRFYVDLSKTRIISLRDILLYMLHLKDIYSVIKTKVNTKEKSTDLMELSTIMYEAGCNTWFTETLGLVAHSIFNTLKKCRDKGIAEKMSKEEIIQAVARQHNDKNLVVYVLGFLNNVIIDDYIICRTSDARTKKSEHEYTVRELSECEIASY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0686 352 Coils Coil 162 182 - -
Ssu9g0686 352 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 18 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0686 Ssu-Chr9 31238464 31239730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0686 18 345 PHD Transcription Factor Family AT5G22260 25.000 1.29e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0686 - - gmx:100813850 201.06