Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0680 ATGGATTTGAACCAAACAATTTTCGATTCAGTCACGTACTTGTATGACGTACCTACAATGCGACAACAGGTCTACAACGTGTGCCTGGATCAGCCAATGAAGATAGTATCTAATGGCATATTTAATAACCACAATGGAGCAATACCTTCGCAATCTGCATTCACAATGCTTGAGCTACAAATAGTTATCATTTTTGCCGTCACGCAAGGCTTTCATTTCATTCTCAAGCGAATAGGGGCCCCTTATTTCGTTTCACAAGTAATGgCTGGTTTTCTTATAGGCCCATCAATTCCCACAGGACCGTTGGAAAAGTACAAGAAGATGTTGTTCCCGTTTGGGAGTCCAGACATCTTGAACACATTGTCATCGTTGGGGTACTCATTCTTCCTCTTCCTGAACTCGGTGCAAATGGACCTAAGTTTGATCACAAAAACGGGAAAGAAGGCTTGGGTCATTGCACTTTCCTCCTATTTTGTTCCCATACTTGTTGGCTATGCTGTCTTGTCCATGTTCAATGCCACGTGGCAAGACATCCTCGGAGCTGACTCGTTTGGTTTGCCCGTGGTGTACATATCTCACAGCGGTTGTTCCTTCGCTGTCGTCTCAAGCTTGCTCAACGACCTCGGAATCCTCAACTCCGAACTCGGACGCCTTGCACTCTCCTCAGCTTTTGTCAACGATCTCTCAGGTGGAATCTGGGCATCACTTGGCACTGCCTTGGTGAGCAGCAGGGATTTGTCATTATCTATCCGTATAAGAAACGTGGTGGGATGTCTTGCTTACATATTCTTAATTCCACTAATTGCGCGTCCAGCGATGATGTGGATTGTGAAGAACACCCCAGAAGGTAGACCCGTGAATAAGATATACATCTATGCCATCATAGTGGCGTTTTTGGCAATCGGGTACTTCGCAGGGAATTTCAACCAGCCCTTCTTAGCAGGGGCTATTGTTTTGGGCATCTCTGTCCCTGAAGGTCCTCCTTTGGGGTCTGAATTGGTTAACCAACTTGAGTTGTTCTCCACGTGGTTCCTGTCCTCAATTTTTGTCACGTGTTGCATCATGAAGGTGGAACTTACCCTATGCAGCTCTTTCGCCGTCATTGCGGTCGTATGCGGCTTCATTGTTATGGTCCACTTAATTAGGTTGCTGTTGTGCATGGGAATTTGCCGCTACTGCAAAATGCCCTCCACGGATGGCTTCTGCCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTTGATATCTGCTCTTATATCCTAGTCTACGATTCAATGGCACAAAGCAAACGAGTAATAGCCATTATGATCTTCTCGGTGTTGATCCTAGGAACAACTTCGAGGCTTGGTGTGAAGGCATTGTATGACCCTGCAAGGAAATACGCAGGGTATCAGAAAAGGAACATCATGAACTTGAAACATAACTCCGAGCTTAGGGTTGTCGCATGCATCCACAAGCCGTGCCACATGCTTCACATCAAGAACGTGCTCCAGCTTTGTTCCCCTGGGCCAGACAACGCGCTAGTGGCAGACATTGTGCATCTCTTGGAGCTAGTTGGAAGGTCCGCTCCCATTTTCATCGCACACAAACTTCAGCAGAGTGTAGGGTCTTCCTACAACTACTCCGGGGAACTTATCGTGACCTTTGATCTCTTCGAACGCGACTATGCTGCGTCTGCCACAGCCAACACCTACACAGCCATATCACCGGTTACACTGATGCATGAAGACGTGTGTCACCTTGCTTTGGACAAAAATGCAGCAATTATAATTCTTCCATTTCACGTGAAATGGGGAGGGGATGGTTCAATTGAGTCGGAGGACAGCAACACAAGGTCAATGAATTCTAAAGTTTTGGATAGGGCACCTTGCTCTATTGGGATTCTAGTGAACCGTGGCCCTTCCGGGGTCAACTCAGCAAGTTACAAGGTGGCCATGGTTTTCTTGGGTGGACCCGATGACAGGGAAGCGTTGTGCTTGGCTAAGAGGTTTGCCAAAAATCGTGACAATAGGTTGTTTGTGTATAGGTTGCTAGCGCGTGACGACGATATCTCAGATTGGGAACACATGATGGATGATGAGGAGTTAAGGGAGGTGCGTGGAGCTTATGTTAAACTAGAAAATGTGACATATGAAGAGTGGACTATAGATGATGCATCCCAAACAACGTTGTTCATCAAAGATATAGCGAAAAGGTTTGATTTTATTGTAGTTGGGAGACGCAATGGGGTCAGAACTTCTCACACGTCAGGGTTGGAAAACTGGACTGAATATTCGGAGTTGGGGGTGATTGGTGATTTGCTTGCTTCACCGGATACGGAGACTAAGGCTTCTATTTTGGTTGTGCAACAACAGTCAACGTCTGCGTCATGA 2370 0.4641 MDLNQTIFDSVTYLYDVPTMRQQVYNVCLDQPMKIVSNGIFNNHNGAIPSQSAFTMLELQIVIIFAVTQGFHFILKRIGAPYFVSQVMAGFLIGPSIPTGPLEKYKKMLFPFGSPDILNTLSSLGYSFFLFLNSVQMDLSLITKTGKKAWVIALSSYFVPILVGYAVLSMFNATWQDILGADSFGLPVVYISHSGCSFAVVSSLLNDLGILNSELGRLALSSAFVNDLSGGIWASLGTALVSSRDLSLSIRIRNVVGCLAYIFLIPLIARPAMMWIVKNTPEGRPVNKIYIYAIIVAFLAIGYFAGNFNQPFLAGAIVLGISVPEGPPLGSELVNQLELFSTWFLSSIFVTCCIMKVELTLCSSFAVIAVVCGFIVMVHLIRLLLCMGICRYCKMPSTDGFCLALILSCKGVVDICSYILVYDSMAQSKRVIAIMIFSVLILGTTSRLGVKALYDPARKYAGYQKRNIMNLKHNSELRVVACIHKPCHMLHIKNVLQLCSPGPDNALVADIVHLLELVGRSAPIFIAHKLQQSVGSSYNYSGELIVTFDLFERDYAASATANTYTAISPVTLMHEDVCHLALDKNAAIIILPFHVKWGGDGSIESEDSNTRSMNSKVLDRAPCSIGILVNRGPSGVNSASYKVAMVFLGGPDDREALCLAKRFAKNRDNRLFVYRLLARDDDISDWEHMMDDEELREVRGAYVKLENVTYEEWTIDDASQTTLFIKDIAKRFDFIVVGRRNGVRTSHTSGLENWTEYSELGVIGDLLASPDTETKASILVVQQQSTSAS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0680 789 Pfam Sodium/hydrogen exchanger family 61 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g0680 789 PANTHER CATION/H+ EXCHANGER 2 15 786 - -
Ssu9g0680 789 Gene3D - 55 461 IPR038770 -
Ssu9g0680 789 PANTHER CATION/H + ANTIPORTER 15 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0680 Ssu-Chr9 30858592 30864048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0680 9 781 Antiporter Super Family AT3G44900 33.694 1.09e-144 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0680 - - gmx:100797272 1218.76