Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0675 ATGTCCACCGTCACCACTTCTTACACTGTCACTCCCAATGAGCCTACTCCAAACGTTTCTTTGTGGTTGTCCGAGAGTGACCAAGTGGCGCGTTGGAGTCACACCTCCACTATCTTCATTTACAAAGAAAACCAAAGCCAAAATGCccttgagagaatgagagattCTCTAAGCAAAATTCTGGTGCACTACTACCCCTTAGCTGGTCGATTGAGTTGGATAGAAGGTGGTCGATTAGCATTGAATTGCAATGCTAAGGGAGTGACATTGATTGAAGCTCAATCACCAAAAACAATGGCTGAATATGGAGATTTTGCACCCAATGAAACATTGAAGAAGGAGCTCATTCCCCCGGTTGATTATTCTCAACCCATTGAGGAGCTTCCCTTGTTGCTTGTTCAATTAACAAAGTTCCAAGGAATCAACCAAGGCCTTGCCATTGGAGTGGCCTTTTCCCATGTTTTGTGTGATGGGTTAGCAGCCATTCGATTCATCAACACATGGGCAAAGCTTACTAGGGGGGAAACATTAGACTCAAATGAAATGGTTCCGTTTCTAGATAGAACAGTTATCAATTCCACATACCCACCAAGGCCACCATGTTTTGATCACCCGGAGTTGAAGCCTCTTCCTCTCAAACTAGGCAGCACTGACACCAAAGAAGAacagaaaaaggagaaaactgCTGTAATTTTGAGACTGACATCACAAGAAGTggagaaattgaagaaaaaaacaaatgatgACCCATCTCTAAAAAAAGAAAGGTTACGACCTTACAGTAGATATGAAGTTATTGCTGCACATATATGGAGATGTGCATCAAAGGCTCGTGAGCTTGATGGTCTTCAACCAACTGTTGTAAGGGTCAGTGCTGATATTCGTAACAGGTTGAACCCTCCTCTTCCAAGAAACTACTTTGGTAACGCTTTGGCAGTGGCATTGACTCCAACATGTCATGCAGGGGAACTCATATCAAACCCTTTAAGCTATGTTGCCCGAAATATTAGGGAAGCAATTGAGTTGTTTAATGATGAGTACATAAGGTCACAATTGGATTTCATTAGGTGCCAAGAGCAATTGGATTGGATAAGGGCTTCGTATTTGGACCAAGTGGAACCCAAAAACGCACCGTTTTATGGGAATCCTAACCTCACCATTGTGAGTTGGATGAGCATGCCGATTTATGAGGCTGATTTTGGATGGGGGAAGCCAGTGTATTTTGGACCAGGTGCTGTGTACCCTGATGGCAAGGCTTACATTATTCGAAGCTCTAATGAGGATGGGTCGCTCATTGTGTCTGTCCATTTGCAAACAGCACATGTGGAACTTTTCAAGAAGTTCTTCTATGAggatatatga 1362 0.4112 MSTVTTSYTVTPNEPTPNVSLWLSESDQVARWSHTSTIFIYKENQSQNALERMRDSLSKILVHYYPLAGRLSWIEGGRLALNCNAKGVTLIEAQSPKTMAEYGDFAPNETLKKELIPPVDYSQPIEELPLLLVQLTKFQGINQGLAIGVAFSHVLCDGLAAIRFINTWAKLTRGETLDSNEMVPFLDRTVINSTYPPRPPCFDHPELKPLPLKLGSTDTKEEQKKEKTAVILRLTSQEVEKLKKKTNDDPSLKKERLRPYSRYEVIAAHIWRCASKARELDGLQPTVVRVSADIRNRLNPPLPRNYFGNALAVALTPTCHAGELISNPLSYVARNIREAIELFNDEYIRSQLDFIRCQEQLDWIRASYLDQVEPKNAPFYGNPNLTIVSWMSMPIYEADFGWGKPVYFGPGAVYPDGKAYIIRSSNEDGSLIVSVHLQTAHVELFKKFFYEDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0675 453 Pfam Transferase family 3 451 - -
Ssu9g0675 453 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 3 453 - -
Ssu9g0675 453 Gene3D - 215 452 IPR023213 -
Ssu9g0675 453 Gene3D - 3 209 IPR023213 -
Ssu9g0675 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0675 Ssu-Chr9 30775462 30777882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0675 4 451 Monolignol Biosynthesis Gene Families AT5G48930 37.556 8.74e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0675 K13065 - gmx:100787038 785.023