Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0656 ATGACGTTTATACGCCTAGACTTGGTTGGACTAAACCAGAGGATCATCGAGAAAGAACttggaaagaagaagaaagagtatTTGGACAATGAGGAGCTTGCTCAGATTGCTATACTCTATGAATCAAATAAGGTTACATTTAAGATAAAGTTGTTTACAGGATCTTCACTAAAAGATGTGGCTATAAAAGGTGCCATAAACCTAAAGGCAGATTGGGTGATACTTGACAGgaaaatgaagaaagatgaAGAGTTTTTCCTGCAGCAGCTTTCTTGTGGTATATCTATAATAAGGGGTAACAATCGGATTGCCACACTAAGAGCACCTTTAGATCTCCCAGTAGAAATACAATGTAACAGCCATGAAACATATGATGAAAGTTTACCAAGTATTCCATATGAAGATCTTTTCGGAATTGATGTCTTCCCTAAGAGTAAATTTAAAGATGATGAGCAAAAGCAGATACAATGCCAGCCATCTGAGGAAGAGGGGTGCTCGAATATTACTACTAATACTAATGAAAAAACATGTCAGACAAGTCCTTATCACCTGAGCACGGATGAAACAGTTATATATAGTAAccaaatgatagataaaatagaaaaagatgagCAATGCCAGGATCAAGAACAGATGCAAAGCATGACCCATGAGACGGAGGGGGACACAACATTTGTGATTAAAAATGATCAAACAACTGCTCGAGAAATAGCTGATCAATTGTGCCAGGATGAAGGAAAGACAAACAACTTCCATGGCGAGAAGTGGGAATTGAGGAATCcaacaaagagaaaagaaatgacTGATCAACCAAAAGATGATCTGCTGAACCAGAATCAAGCACAGACACTGAGCATTTCCAATGGGGTTATATTGCATGGAGAGCAAGAGAAAAGTATTTTGGAAAATTCAATGTGCACTTTCTGCTCTGTCTGCAAAACTAGACGACCAACTATTGGATGGCAAAAGGAATTCACATATGAAGAACTGCAAGCAGCCACAGATGCATTTTCATTGAAAAACTGTCTCTCTCAGACTGGTCATCTATTCACTTTCAGAGGCCAGCTGGAGGGAGGGCTGAAACTAGTAGTTAAGCAGCATGATATAACAAACACTCAAGTAAGGGAAAAAATGAAGTCAGAAATCCAAACCATCCTCAAAGCTAGACATAAGAATGTGATCATGCTATTGGGTTCATCTACCTCAGAACATTTCCTGTTGACTGTATATGAGTATGCATGCAATGGTTCACTCGACAAGTTTCTATCAAAGTTGATCACTGGGCGAAGGACTACAGATATAATGTCAGAAGATAAAAGCCTTGTCGAGTGGGCAAAGCCTCTTCTTAAAGGAAAGAACTACTCACAGTTGGTGGATCCCATAATCAGAAACTCATACGAAGAGGATCATCTTCGTTGGCTGGTCCAAGTAACAACACAATGTCTCAAAAAGAACCCTAAGGAAAGATATTCAATGAATATGGTTGTTTCTGCATTACAAGACATAGCAGACAGTGAACTCTGCCACATGACAGAAGACATTACTCCAGCTATATCAGATTCAAGAATTGTGCTAGACATAAATGGATCACAAGgtccaacaacaacaaaagctgATCAGCCAAGTCAGGAAGAGGAGCAAATCGAGAGCAGATTCGATGGGGAGGAAAAGAAGTTAAGACTAACAGTTGAGaataatcacttttacatgATAGGCCGGAGAAACTCTGATAAACTGAGCCAGATTGAAGAACAGATGCAGAGCAGGCCCCAAGGTGAGGAGAGGAGCTCAGGAAAGATGATAATAAATGACCACACAATGGATCAGACAGTAGTTGATCAGATGAGTGAGTTTGAAGAACAGATGCCAAGCACCCTCTATAGGGAGGGCATCACAACACAGAAAAATAGCTTTAAGCACATGATAGGTCACACAAAAGGTGACAAGCTGAGCCAGGATCAGGAAGAGGGGATCAGCTTTGTTGAAATGAAGATAGGCTTAATACCAGCACCTATTAGTGGAATGATAGATCAAACAAAAGCAGATCCGCCGGTCCAGGATAAAACACAAACGAAGAGAAGCTCCCATGAGAATTTACTGGATGGACGTCAAGGTGAAACCATTTTGGAGAATACAAAGTCCTCTGCATGCTCTATTTGCAAAAGTAGACGTCCAAACATTGCATGTCCAAAAGACTTTACTTATGATGTAATCTTAGAAGCTACAGAAGGATTTTCAATTGAGAACTCTCTATCTGAAAGTGAAGATGGACCTACTTTCAAAGGCCTGCTAGAGAGACAGGTGAAAATAGTTGTTAAGAAATATCAAATTACTACGTCCCATGAAGAGAAGATATTGAAGTCAGAAGTACAGTCGTTCATCAGTGCTAGACATAAAAATGTGGTCATGCTGTTGGGTTTATGCACAAATAAAAGCAAATTGATGATTGTGTATGAGCGAGTATGCAATGGTTCACTTGACCAGTACCTAACAAGGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGACTGAAAGTTGCAATGGGTACTGCCAGAGGTTTACAGTACCTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACGCATGACTTTGAACCACTGATTGGAGATTTCAGCTTCAGAAAAGTGAAACTTGAACCAAAGAAATCCAGCAAAGATAAAAGTGTAAGAAATTCTGGATATACAGCACCTGAGTATCTGGAGAATGGGAAACTATCAAATAAGACAGATGTGTACTCCTTCGGAGTGGTTCTTTTAGAGCTGATCACTGGTCGGAGGGCAAATGACAAATTACCAGGTGGAAAAAGCCTTGTTGGATGGGCAAGGCCACTATTGGGAGGAAAGAAGAAGTACGCACCGTTGGTGGATCTGAAAATCAGTAACTCCtatgaagaagaaaaacttCAATGGTTGATCCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGGAAGAGCTACAATGAATATGGTTGTATCTGCATTGCAAGGCATAGAAGAATCTGCTGAGTGTTGTGTAATTGAAGATTCTTCCCCAGAAAAGTCATATTTACCACATGATGATCTTGCCAAGATTAGGACACAAGGTCAAATAAAGGATGATCTAGTGAGCCAGGACCAAGAACGGATTGACAGAACCCAATATGAGGAGGAAAAAAGCCTAAGATTAACAGTCAAAACCAATCACATGATAAGTCAGAGAAATGCAGATCAGCTGAGACAGGGTGGAGAAGATGTGCAGAGAAGCCCCCGTGAGGAGATGTCCGGAGTAACAGTTATCAGCAATGACATGATTGATCAGATAAACCCTGACCAACAAATCCAGGAAAAACAGCATATGAAGGGAAGCTTCCACATAGAAGAAATGGGTCAAAAAGAAGTAGATATGCAACAAAAGGTGAGCAAGGATAAAAAACAAATGCAGGGAAGCTGTGATGAGGATTTGTTGAATGGGAATGAAGCCAAAACCATTTTGGAGACTTCAAAGTCTTCTGTATGCTCAATCTGCAAAAGTAGGCGTCCAAACAGTGCATTGCAAAAGAAATATACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCAATTAAGTATTCTCTACGTGAAGGTGAATATAGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTTATTAAGCAACATACATTCACAAACTTACAGGAACAGGAGGTGTTTATGTCAGAATTCCAATTGCTCTTAAATGTCAAACATGAAAACGTGATCATGTTGTTAGGTTCATGTAGACGAAAAAGTCAATTGCTGACTGTATATGAGCAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGGGGAAGTTGTAGATCATTGACATGGGGAGAAAGAGTGAAAGTTGCAATAGGTGTTGCCAGAGGCCTAAAGTATCTACATGAGAATAACATAATACATGGAAGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTTAAACCACTGGCAAGGCCACTTATTGGTGAAAGAAAGTATCGAGAGTTGGTGGATCCCAAAGTCAGCAGCTCCTATGATGAACAAGAACTTGTTTCATTGGTCCACGTaacaaaaaattgtctaaaaaagaattcaaaggaaAGGTTCACAATGAATATGGTTGTCTCTGCACTGCCCTATGTAGTAGATAGCAATGACATCTATGTAAAGGAAGACTTTTCACCAGAAAAGCCAAATTTTTCAGATGTAACAAACTCAAAAGTTAAGGAGGAATCACTGGAAGAAGAAGATTTAGGCATAGAGAATACTGAAGAGGAAAGGAGGCATCACAGAGAAGGTGAGAAGGAGGAATCACTGGAGGAAGAAGATTTAGACACAGAGAATAGTGAAAAGGTAAGGAGGAACCACAGAGAAGGTGAGGAGGAATCACTGGAGGAAGAAGATTTAGGCACAGAGAATAGTGAAGAAAGAGAGGACAACATAACTTGTAGTACAGGCAATAATGAAACAGAAATTACTCAGGAGTGTGACAGCTACCCAACTTGTGGTGAAAGTAGCAAGgaaacagaagaaaaagaaagctcAAGCACCAAGGTATGTCAAAAATGGGAAGGGTGCTTAACTTATGGTGGAGCTAGAGAATTTTATCTTGAAGGGGCCCAAGAATATGCAGTATGTGAAGAATTTTTCGGCTGGTGTGGTTCAATTTGa 4737 0.3842 MTFIRLDLVGLNQRIIEKELGKKKKEYLDNEELAQIAILYESNKVTFKIKLFTGSSLKDVAIKGAINLKADWVILDRKMKKDEEFFLQQLSCGISIIRGNNRIATLRAPLDLPVEIQCNSHETYDESLPSIPYEDLFGIDVFPKSKFKDDEQKQIQCQPSEEEGCSNITTNTNEKTCQTSPYHLSTDETVIYSNQMIDKIEKDEQCQDQEQMQSMTHETEGDTTFVIKNDQTTAREIADQLCQDEGKTNNFHGEKWELRNPTKRKEMTDQPKDDLLNQNQAQTLSISNGVILHGEQEKSILENSMCTFCSVCKTRRPTIGWQKEFTYEELQAATDAFSLKNCLSQTGHLFTFRGQLEGGLKLVVKQHDITNTQVREKMKSEIQTILKARHKNVIMLLGSSTSEHFLLTVYEYACNGSLDKFLSKLITGRRTTDIMSEDKSLVEWAKPLLKGKNYSQLVDPIIRNSYEEDHLRWLVQVTTQCLKKNPKERYSMNMVVSALQDIADSELCHMTEDITPAISDSRIVLDINGSQGPTTTKADQPSQEEEQIESRFDGEEKKLRLTVENNHFYMIGRRNSDKLSQIEEQMQSRPQGEERSSGKMIINDHTMDQTVVDQMSEFEEQMPSTLYREGITTQKNSFKHMIGHTKGDKLSQDQEEGISFVEMKIGLIPAPISGMIDQTKADPPVQDKTQTKRSSHENLLDGRQGETILENTKSSACSICKSRRPNIACPKDFTYDVILEATEGFSIENSLSESEDGPTFKGLLERQVKIVVKKYQITTSHEEKILKSEVQSFISARHKNVVMLLGLCTNKSKLMIVYERVCNGSLDQYLTRGSFQSLTWKQRLKVAMGTARGLQYLHGNNIIHGNIKPSNILLTHDFEPLIGDFSFRKVKLEPKKSSKDKSVRNSGYTAPEYLENGKLSNKTDVYSFGVVLLELITGRRANDKLPGGKSLVGWARPLLGGKKKYAPLVDLKISNSYEEEKLQWLIQVTEQCLRKNPKGRATMNMVVSALQGIEESAECCVIEDSSPEKSYLPHDDLAKIRTQGQIKDDLVSQDQERIDRTQYEEEKSLRLTVKTNHMISQRNADQLRQGGEDVQRSPREEMSGVTVISNDMIDQINPDQQIQEKQHMKGSFHIEEMGQKEVDMQQKVSKDKKQMQGSCDEDLLNGNEAKTILETSKSSVCSICKSRRPNSALQKKYTYEELQAATEGFSIKYSLREGEYRPAFRGQLENNQEIVIKQHTFTNLQEQEVFMSEFQLLLNVKHENVIMLLGSCRRKSQLLTVYEQACNGSLDQYLSRGSCRSLTWGERVKVAIGVARGLKYLHENNIIHGRIKPSNILLNHEFKPLARPLIGERKYRELVDPKVSSSYDEQELVSLVHVTKNCLKKNSKERFTMNMVVSALPYVVDSNDIYVKEDFSPEKPNFSDVTNSKVKEESLEEEDLGIENTEEERRHHREGEKEESLEEEDLDTENSEKVRRNHREGEEESLEEEDLGTENSEEREDNITCSTGNNETEITQECDSYPTCGESSKETEEKESSSTKVCQKWEGCLTYGGAREFYLEGAQEYAVCEEFFGWCGSI 1578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 1414 1436 - -
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 1502 1525 - -
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 30 124 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 502 1105 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 ProSiteProfiles Protein kinase domain profile. 745 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 1468 1483 - -
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 425 520 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 30 124 - -
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 686 700 - -
Ssu9g0656 1578 SUPERFAMILY Protein kinase-like (PK-like) 329 507 IPR011009 -
Ssu9g0656 1578 SMART serkin_6 745 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0656 1578 Gene3D Transferase(Phosphotransferase) domain 1 1286 1343 - -
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 1444 1459 - -
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 267 424 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 1346 1419 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 Pfam Protein tyrosine and serine/threonine kinase 359 425 IPR001245 GO:0004672|GO:0006468
Ssu9g0656 1578 Pfam Protein tyrosine and serine/threonine kinase 749 1010 IPR001245 GO:0004672|GO:0006468
Ssu9g0656 1578 Pfam Protein tyrosine and serine/threonine kinase 1214 1341 IPR001245 GO:0004672|GO:0006468
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 1414 1537 - -
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1149 1345 - -
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 676 707 - -
Ssu9g0656 1578 Gene3D Phosphorylase Kinase; domain 1 310 412 - -
Ssu9g0656 1578 Gene3D Transferase(Phosphotransferase) domain 1 415 519 - -
Ssu9g0656 1578 Gene3D Transferase(Phosphotransferase) domain 1 821 1030 - -
Ssu9g0656 1578 Gene3D Transferase(Phosphotransferase) domain 1 1344 1415 - -
Ssu9g0656 1578 ProSiteProfiles Protein kinase domain profile. 1209 1461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0656 1578 PANTHER OS01G0253100 PROTEIN 1149 1345 IPR045271 GO:0004714|GO:0006468
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 267 424 - -
Ssu9g0656 1578 MobiDBLite consensus disorder prediction 529 553 - -
Ssu9g0656 1578 SUPERFAMILY Protein kinase-like (PK-like) 729 1015 IPR011009 -
Ssu9g0656 1578 Gene3D Phosphorylase Kinase; domain 1 1169 1283 - -
Ssu9g0656 1578 Gene3D Phosphorylase Kinase; domain 1 706 819 - -
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 425 520 - -
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 502 1105 - -
Ssu9g0656 1578 SUPERFAMILY Protein kinase-like (PK-like) 1192 1401 IPR011009 -
Ssu9g0656 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1346 1419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0656 Ssu-Chr9 29907482 29924095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0656 405 522 Trihelix Transcription Factor Family AT5G38560 30.147 6.18e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Ssu9g0656 PK_Tyr_Ser-Thr 2.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0656 - - ccaj:114916182 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3270 6 74399229 74403631 Ssu9g0656 9 29907482 29924095 PCT