Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0638 ATGAATGGGCAAAAAATTAAGCGTCGAGTGGGTAAGTATGATGTAGGGAGGACCATCGGTAAGGGAACTTTTGCAAAGGTGAAGTTTGCAAGGAACTCTGAGACTGGGGAGGCTGTGGCTCTCAAGATTCTTGACAAAGAGAAGGTTCTCAAGTATATGATGGCTGAGCAgATCAGTCGAGAAATAGCCACGATGAAGTTAATCAAGCATCCAAATGTTGTTCAACTATACgagGTCATGGGGAGCAGgacaaaaatatacattattttagaGTTTGTGACTGGGGGAGAGCTCTTTGACAAAATTGTAAACAATGGACGGATTAGTGAAAAGGAAGCGCGTAGGTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTCAAGCTAGAAAACTTGCTATTAGATGCTTCTGGGAACCTTAAAATATCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTTCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGCGTGATCCTGTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACATTAATCTTTTGAAcctgtataaaaaaATTTCAGCTGCTGAATTTACTTGCCCCCCTTGGCTTTCTTTTAGTGCCAGGAAATTGATAACTAGAATCTTGGATCCCAACCCCATGACTCGTATCACTGCACCCGAGATTTTGTGTGATGAATGGTTTAAGAAAGACTATAAACCTCCAGTTTTCGAGGAGACAAAGGAGACTAATGTTGATGATGTGGAAGCTGTCTTTAAAGATAATGAAGTGCACAATGCAAGAGAGAAGAAGGAAGAGCAGCCAACACCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGACATAGACCAGGGATTTAAAAGGGAAATAAGGTTCACATCAAAATGCCCTGCCAATGAGATAATCAACAAGATTGAAGAAGCAGCaaaacctcttggttttgatgTGCAGAAGAAAAATTTCAAGATGAAGCTTGCAAATTTGAAAGCTGGAAGGAAGGGAAACCTCAATGTTGCCACAGAGATATTTCAAGTGGCACCTTCTCTTCACGTGGTTAAGGTGCATAAAGCAAAAGGTGATACATTGGAGTTCCTTAAGTTCTACAACAAGCTTTCAACACGCCTGGAGGATGTTGTTTGGAAAACTGAAGATGACATGGAAGATACAAAGTGA 1320 0.3985 MNGQKIKRRVGKYDVGRTIGKGTFAKVKFARNSETGEAVALKILDKEKVLKYMMAEQISREIATMKLIKHPNVVQLYEVMGSRTKIYIILEFVTGGELFDKIVNNGRISEKEARRYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDINLLNLYKKISAAEFTCPPWLSFSARKLITRILDPNPMTRITAPEILCDEWFKKDYKPPVFEETKETNVDDVEAVFKDNEVHNAREKKEEQPTPMNAFELISLSKGLNLENLFDIDQGFKREIRFTSKCPANEIINKIEEAAKPLGFDVQKKNFKMKLANLKAGRKGNLNVATEIFQVAPSLHVVKVHKAKGDTLEFLKFYNKLSTRLEDVVWKTEDDMEDTK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0638 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 4 432 - -
Ssu9g0638 439 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Ssu9g0638 439 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0638 439 Gene3D Transferase(Phosphotransferase) domain 1 93 299 - -
Ssu9g0638 439 PANTHER - 4 432 - -
Ssu9g0638 439 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0638 439 Gene3D Kinase associated domain 1, KA1 305 430 - -
Ssu9g0638 439 CDD STKc_SnRK3 12 267 - -
Ssu9g0638 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Ssu9g0638 439 CDD CIPK_C 312 426 - -
Ssu9g0638 439 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g0638 439 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Ssu9g0638 439 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Ssu9g0638 439 Pfam NAF domain 308 367 IPR004041 GO:0007165
Ssu9g0638 439 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0638 Ssu-Chr9 28903824 28910427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0638 4 391 CBL-interacting serine-threonine protein kinases AT2G26980 80.928 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ssu9g0638 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0638 - - gmx:100794566 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0638 9 28903824 28910427 Ssu6g3262 6 74255663 74261135 PCT