Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0630 ATGGCGGAACTTGCAGTGTCCTTGGCACGAGACAAATTGCTTCCACTACTAAGCGACGAAGCAAAACTGCTTTGGGACATCCCCAAAGAATTTGCAGACATACAAAAAGAACTAGAGTACATTCAAGGCTCCCTCGAGGAGGCAGATAGAAGGGCCGCAGAAGAAGGAGACAACACAAACAAGGGAATCAAAACATGGGTCAAAGATTTGAGGGAAGCGTCTTTCCGCATAGAAGATGTCATCGATGAATATATGATCTATTTGGAACAACAGCCTCACGATCCTGGATGTGCAGCTTTGCTCTGTCAGATTATTCACTTTATTGGAACTTTGATACCTCGTCATCGAATAGCATCAGAGATTCAGCAGATTAAGTCAGTTGTTCAAGAAATCAAGCAAAGAGGCATAGATTCTCGTTTTTTCACGGAATCAAGCAAACCTTCTCTTGAGCAAGGACACAGCAGCTACAGAGGTGGCCAAGGTGTCCAATGGCACGACCCGCGAATGCGTTCCCGTTACCTTGACGAAGCTGAAGTTGTTGGCCTTGAAGGCCCAAGAGATGAATTGATTGGTTGGTTAGTGGAGGGACCGGCAGAGCGCAGTGTCATCTCTGTGGTAGGAATGGGAGGGCTAGGAAAAACCACTCTTGTCAGCAGAGTTTTCAACAACCAGAATGTGATTGCGCACTTTGATTGCCATGCATGGATCACAGTGTCTCAATCCTACACTGTGGAAGGGTTGATGAGAGACTTGTTGATGAAgttatgcaaagaaaaaagggTGGATCCTCCTCAAGGTATCTCTAAAATGGGTCAAGATTTATTGATTGATGAAGTGAGAAACCATTTGCAACAGAAGAGGTACGTTGTCGTTTTCGATGATGTATGGAATGTAGAACTTTGGGGTCAGATTGAAAATGCCATGCTTGATAATAAAAATGGAAGTAGAATATTAATCACAACTAGGATGCACGATGTTGTAAACTCCTGCAAGAACTCTCCTTTTGATCGGGTGCATGAGCTGAAACCTTTAACTCCAAAAGAATCTTGGGAACTCTTTTGCAAAAAGGCATTTCGATTTCACAACAATGGACATTGTCCAAATGATCTCAAGGAAAGATCTTctgattttgttgaaaaatgcaAGGGTTTACCATTAGCAATTGTGGCTATTGGTGGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATGGGAAAAAATTGGCGAAGCCTAA 1236 0.4175 MAELAVSLARDKLLPLLSDEAKLLWDIPKEFADIQKELEYIQGSLEEADRRAAEEGDNTNKGIKTWVKDLREASFRIEDVIDEYMIYLEQQPHDPGCAALLCQIIHFIGTLIPRHRIASEIQQIKSVVQEIKQRGIDSRFFTESSKPSLEQGHSSYRGGQGVQWHDPRMRSRYLDEAEVVGLEGPRDELIGWLVEGPAERSVISVVGMGGLGKTTLVSRVFNNQNVIAHFDCHAWITVSQSYTVEGLMRDLLMKLCKEKRVDPPQGISKMGQDLLIDEVRNHLQQKRYVVVFDDVWNVELWGQIENAMLDNKNGSRILITTRMHDVVNSCKNSPFDRVHELKPLTPKESWELFCKKAFRFHNNGHCPNDLKERSSDFVEKCKGLPLAIVAIGGLLSGKEKTPFEWEKIGEA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0630 411 Gene3D - 4 118 - -
Ssu9g0630 411 MobiDBLite consensus disorder prediction 143 163 - -
Ssu9g0630 411 PANTHER DISEASE RESISTANCE PROTEIN RP 30 407 IPR044974 GO:0006952
Ssu9g0630 411 PRINTS Disease resistance protein signature 202 217 - -
Ssu9g0630 411 PRINTS Disease resistance protein signature 282 296 - -
Ssu9g0630 411 PRINTS Disease resistance protein signature 381 395 - -
Ssu9g0630 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 408 IPR027417 -
Ssu9g0630 411 PANTHER - 30 407 - -
Ssu9g0630 411 CDD RX-CC_like 2 132 IPR038005 -
Ssu9g0630 411 Pfam NB-ARC domain 186 408 IPR002182 GO:0043531
Ssu9g0630 411 Gene3D - 344 411 IPR042197 -
Ssu9g0630 411 Gene3D - 169 334 IPR027417 -
Ssu9g0630 411 MobiDBLite consensus disorder prediction 143 158 - -
Ssu9g0630 411 Pfam Rx N-terminal domain 5 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0630 Ssu-Chr9 28763172 28764407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0630 178 402 WRKY Transcription Factor Family AT5G45050 26.222 2.32e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0630 K13457 - gmx:100787762 652.899