Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0623 ATGGGGATTCAGACAATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCTTCTTTGTCTAGGCAAGGTTCTTGGTATAGTCTCACTCTTGATGAGGTTAATAGTCAATTAGGAGACATGGGGAAGCCACTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTTCGGTGATAGGCGCGATCAGTGAGAACATGTCATCCTCTTCCTCGCTCCAACGGCAGGCCAGCCTGACACTGGCTCACGCGTTGAGTGGGAAGACAGTGGATGATGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAGGTATGGAGAGGATGTGAAAAGTCAGGATAGAGAAATGACTCTTGGTGAAACCACCTTGGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCCTCTATCAGTCCAGCTGTGGGGTTGGACACAATGAATTCCCCCGCCCCTCAAGTTTTTCAACAGAAGACAGGCCTGTCATCCTCCCCTTCAATTGGCAGTTTATCAGACACAAGACTGGGCCGGAAAAGGGATGCTCCTGATGCGTATGAGAAAACTCTGGAAAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGATCCCGAGCCCGAAAACAGGCTTACCATAATGAGCTGGTTGGCAAGGTTTCCCGtctagaagaagaaaatgtaaAGCTCAAGAAAGAGAAGGAATTTGAAGAAAGGTTACCGCCGGATCCATTGCCCGAACAAAAATATCAGCTTCGAAGACATAATTCTGCCAATTTCTGA 816 0.4681 MGIQTMGSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNSQLGDMGKPLGSMNLDELLQNVWTAEASKSSVIGAISENMSSSSSLQRQASLTLAHALSGKTVDDVWREIQQGQKKRYGEDVKSQDREMTLGETTLEDFLVQAGLFAEASISPAVGLDTMNSPAPQVFQQKTGLSSSPSIGSLSDTRLGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLPPDPLPEQKYQLRRHNSANF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0623 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Ssu9g0623 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Ssu9g0623 271 PANTHER BZIP TRANSCRIPTION FACTOR 35 268 - -
Ssu9g0623 271 SUPERFAMILY Leucine zipper domain 201 247 IPR046347 GO:0003700|GO:0006355
Ssu9g0623 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Ssu9g0623 271 Gene3D - 199 251 - -
Ssu9g0623 271 CDD bZIP_plant_BZIP46 201 238 - -
Ssu9g0623 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 268 IPR043452 GO:0003700|GO:0045893
Ssu9g0623 271 MobiDBLite consensus disorder prediction 243 271 - -
Ssu9g0623 271 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
Ssu9g0623 271 MobiDBLite consensus disorder prediction 1 21 - -
Ssu9g0623 271 MobiDBLite consensus disorder prediction 243 261 - -
Ssu9g0623 271 MobiDBLite consensus disorder prediction 165 181 - -
Ssu9g0623 271 Coils Coil 224 251 - -
Ssu9g0623 271 MobiDBLite consensus disorder prediction 165 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0623 Ssu-Chr9 28686105 28690605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0623 21 271 bZIP Transcription Factor Family AT3G56850 47.203 9.30e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu9g0623 bZIP_1 1.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0623 K14432 - gmx:100798549 456.447