Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0622 ATGAGTTTGAGATATGGCATTGTGGTCTTAGTTGCTTTAGTGCTTCTGCCCCACATGGCTTCTGCGGGTTCTATTGTGAAGAGCCTGCCGGGTTACGAGGGAGATCTTCCATTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGGAGGAAAGGtgcaaatattttacttatttgtgGAGTCTCAAAGAAATCCCTTCATTGATCCACTGTTACTTTGGTTCGTTGGAGGTCCAGGTTGCTCCGCCCTTTCGGCgttcttttttgaaaatgGGCCTTTAGTAATGAATGACAATTACAGTGGAAACCTTCCAAAACTTGAGTTGAATCCATATGCGTGGACACACACATTGAATATGATGTATATAGATATGCCAGTAGGCACAGGATTTTCATACTCACAAACACAAGAAGGTTATTACAGTAGTGACACACTCTGGGTGGAGCATACTTATGAACTTCTACAAAAGTGGTTTATTGATCATCCGAAGTTTAGCTCAAATCCATTTTACATTGGTGGTGGCTCATATTCAGGAATAACTACTGGTCCTCTTGTTCAAAAAGTATATGAAGGTTACATAGCAAGACGCGTGCCACTCATAAACATCAaaGGTTATGTGCTCGCAAGCCCAAGTGTTGACGTGTATCAGAACCAGAACATGAAAGTTTTATATGCATATTATAGGACTCTTATACCAGAAGCACTCTATAAGACgatgaaagaaaattgtaaCGGTAATTATGTAAACATTGATCCAAAAAACACAAAGTGTGTCTCAGATTATGAAGCTTATTCTGAGCTAGTTCGTTACATAAACGACCAACAAATTATGGAACCTCTTTGTATTACTACGCCTGGGGTGAATGGAGAAATCCTACAAGAAGTTCAAGATCCTCCAACATTCTGGTGTAGAAGCTATTATCATATCCTTGTTGACACATGGGCTAATGATGAAGATGTGCGAAAGGCCCTTCATGTAAGAGAGGGAACTAAGGAGGAATTCCTGAGATGCAACAGGACTCTGGCATACACCACAACTCTACTAAGCACAGTAGAATATTATCGGAATCTCACTAATGCCAACCTCGAAGCTCTTGTTTACTGTGCTGATCTTGATATGAGTATACCACACCTAGGTACACAATATTGGATCAACTCATTCAACATGAGTATACGTGACAAATGGCGTGCATGGTTTGTTGACGGTCAAGTGGCCGgATACACAGAAATCTACAACATGAAAGAAGACCATTACTTAACATATGTGATCGTGAAGGGCGCTGGACATGTGGCCCAGACATTTAAACCCAAGGAAGTTTATCATTTGATCAATAGAtggttttcattttctctaatCTAA 1362 0.3884 MSLRYGIVVLVALVLLPHMASAGSIVKSLPGYEGDLPFKLETGYIGVGEGGKVQIFYLFVESQRNPFIDPLLLWFVGGPGCSALSAFFFENGPLVMNDNYSGNLPKLELNPYAWTHTLNMMYIDMPVGTGFSYSQTQEGYYSSDTLWVEHTYELLQKWFIDHPKFSSNPFYIGGGSYSGITTGPLVQKVYEGYIARRVPLINIKGYVLASPSVDVYQNQNMKVLYAYYRTLIPEALYKTMKENCNGNYVNIDPKNTKCVSDYEAYSELVRYINDQQIMEPLCITTPGVNGEILQEVQDPPTFWCRSYYHILVDTWANDEDVRKALHVREGTKEEFLRCNRTLAYTTTLLSTVEYYRNLTNANLEALVYCADLDMSIPHLGTQYWINSFNMSIRDKWRAWFVDGQVAGYTEIYNMKEDHYLTYVIVKGAGHVAQTFKPKEVYHLINRWFSFSLI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0622 453 Gene3D alpha/beta hydrolase 20 289 IPR029058 -
Ssu9g0622 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 Gene3D - 304 451 - -
Ssu9g0622 453 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 8 450 - -
Ssu9g0622 453 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 450 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 Pfam Serine carboxypeptidase 30 449 IPR001563 GO:0004185|GO:0006508
Ssu9g0622 453 SUPERFAMILY alpha/beta-Hydrolases 26 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0622 Ssu-Chr9 28632576 28649068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0622 18 49 Calmodulin-binding Proteins AT2G22960 68.750 6.17e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0622 K16296 - gmx:100798023 551.592