Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0611 ATGGTGGTTAGTGGAAGCAGGTCTCTAGCGGTGGTGACAGGTGGAGGTGCAGTGTGGCTGCGGCAGCCATCAACGTGTAGAGAGGAGGCTACGCAAGAGAGAACGATGATGGCTTTAGGTTTCTGTGATGTTTTTGAGATGGGGGCAGTGGCGCATGGTTGGAGTGCATCGCTGGCTATGGCGGCGACATGGTCCAACAATGGTTATTCAATGGAGGTGGCACTTCCTGGTTCGAAAATGGTGGCTGCTTTCGTAGCTGCGTGGGCTGAGACAAGGACTTTTAAGTTTCTGGTTCTCTATATATTGCGTGAGTATTGTGTTCCTACTCTCAGCTTCTTTTCGTACCACCATTACCAAAGTGCAGTTTGGTTTTGCAAGTTTGCTATGGAAGATAACAAACGGGCTCCAGCTCCAACAACTGAAGGACAACCTATACGATGTAAAGCGGCCGTTGCCAGAAGAGCTGGTGAGCCGTTGGTTATGGAAGAGATCATTGTGCCTCCACCAATGTCTCGTGAGGTGCGGATTCGTATTATATGTTCCTCTCTCTGCCACAGCGACATCACTTTTTGGAAACTCCagGAACTTCCTGCCATTTTCCCAAGAATCCTAGGTCACGAGGCAATTGGGGTTGTGGAAAGTGTAGGCAAGGATATAACTGAAGTTACAAAAGGTGATGTGGTTATTCCAGTTATCCTACCAAATTGTGGGGAGTGCATAGATTGCGAATCAAACAAGAGCAACCAGTGTACTAATTTATCTTTCACCGTGTCTCCTTGGATGCCTCGAGACGGTACCACTAGATTCACTGATCAAAATGGAGATATCATATACCATTTCCTGTATATTTCAAGTTTCAGTGAGTACACTGTGGTGGACATTGCCAATGTAATAAAGGTTGACCCACAAATTCCTCCAGACAGGGCATGCCTTCTCGGTTGTGGTATTTCAACTGGGGTAGGTGCTGCTTGGAGAACTGCAAATGTGGAACCAGGGTCTACAGTAGCTATTTTTGGGCTGGGATCTATTGGATTAGCAGCTGCAGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATTGGTGTGGACATCAACCcagaaaaatttgaaattgGGAAAAAGTTTGGACTCACTGACTTTGTCCATGCTGGAGAATGTGATAACAAAACCGTGAGCCAGGTTATCATAGAGTTAACTGGTGGCGGAGCAGACTATTGCTTTGAATGTGTGGGTGTAGCATCACTGGTGCAAGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTGTAGGAGTGGACAAGCCAGGAGCCAAGATAAGCCTCAATTCTTATGAGGTCCTTCTGGATGGGAAGAGCCTCATGGGATCTTTATTTGGTGGTCTCAAACCCAAGTCTGATGTACCCATTCTCCTTAAACGTTACATGGACAAGGAATTGCAGTTGGATGAATTTGTCACTCATGAGGTGGAGTTTAAGGACATCAATACTGCTTTCGATTTATTGATTAAGGGAGAGTGTCTTTGA 1533 0.4547 MVVSGSRSLAVVTGGGAVWLRQPSTCREEATQERTMMALGFCDVFEMGAVAHGWSASLAMAATWSNNGYSMEVALPGSKMVAAFVAAWAETRTFKFLVLYILREYCVPTLSFFSYHHYQSAVWFCKFAMEDNKRAPAPTTEGQPIRCKAAVARRAGEPLVMEEIIVPPPMSREVRIRIICSSLCHSDITFWKLQELPAIFPRILGHEAIGVVESVGKDITEVTKGDVVIPVILPNCGECIDCESNKSNQCTNLSFTVSPWMPRDGTTRFTDQNGDIIYHFLYISSFSEYTVVDIANVIKVDPQIPPDRACLLGCGISTGVGAAWRTANVEPGSTVAIFGLGSIGLAAAEGARLCGATRIIGVDINPEKFEIGKKFGLTDFVHAGECDNKTVSQVIIELTGGGADYCFECVGVASLVQEAYASCRKGWGKTIVVGVDKPGAKISLNSYEVLLDGKSLMGSLFGGLKPKSDVPILLKRYMDKELQLDEFVTHEVEFKDINTAFDLLIKGECL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0611 510 Pfam Zinc-binding dehydrogenase 343 466 IPR013149 -
Ssu9g0611 510 Gene3D - 319 459 - -
Ssu9g0611 510 PANTHER ALCOHOL DEHYDROGENASE 140 510 - -
Ssu9g0611 510 SUPERFAMILY GroES-like 140 327 IPR011032 -
Ssu9g0611 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 304 479 IPR036291 -
Ssu9g0611 510 Gene3D - 150 510 - -
Ssu9g0611 510 Pfam Alcohol dehydrogenase GroES-like domain 172 299 IPR013154 -
Ssu9g0611 510 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 140 510 - -
Ssu9g0611 510 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 205 219 IPR002328 GO:0008270|GO:0016491
Ssu9g0611 510 SUPERFAMILY GroES-like 467 510 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0611 Ssu-Chr9 28388472 28400575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0611 173 508 Monolignol Biosynthesis Gene Families AT2G21730 25.882 2.60e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0611 K00121 - gmx:100817521 674.47