Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0588 ATGGGAGGTCTTGGAAAAACAACCCTTGCTCAATCCCTTTATAATGACAGTCAAGTGCAGAAGCATTTTGATTTGACTGCTTGGGCATGGGTGTCAGatgattttgatgtttttagGGTAACAAAGAAAATTCTTGAGTCTCTCACATCGAAAGattctaatattactaatattgaTAATCTTCGTGTTGAATTAAGAAATAGCCtgagagagaagaaatttttgcttGTGCTTGATGACCTTTGGAATGACAAGTATAATGATTGGCATCACCTAATAACTCCTCTCAGCAGCGGGAAAAAAGGAAGTAAAATCATTGTGACAACCCGACAACAAAAAGTTGCTCAAGTCACACATACATTTCCCATTTGTGAGCTGAAACCTCTTACTGATGAAAATTGCTGGCATATATTAGCCAGACATGCATTTGGATATGAAGAAGCCCCACCACCGAGAAAGCGGCTATCGACGACGTGCCTCCCCCTTTCGCTCCCTCGATATCGCTTCCACGTGGACAAGTATGCGGAGCAAGAGAAGGAGCTGAGAGAGAGAACGAGGAGTGTCAACGTGATGAAGATCTTCTTCAACGAGAGGCTGATCAGAGGTCTGGAAGCTGAACACGCTGAGGAAGAATGGGGGCGAGGAGGGACTCTTCAAATCCATCCGGGCACTGAGCGGAAGGAGGACCAAACCCTAAaagtgaagaagaaaagagttaAAGTGTCAGTTTAA 732 0.4057 MGGLGKTTLAQSLYNDSQVQKHFDLTAWAWVSDDFDVFRVTKKILESLTSKDSNITNIDNLRVELRNSLREKKFLLVLDDLWNDKYNDWHHLITPLSSGKKGSKIIVTTRQQKVAQVTHTFPICELKPLTDENCWHILARHAFGYEEAPPPRKRLSTTCLPLSLPRYRFHVDKYAEQEKELRERTRSVNVMKIFFNERLIRGLEAEHAEEEWGRGGTLQIHPGTERKEDQTLKVKKKRVKVSV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0588 243 PANTHER - 1 149 - -
Ssu9g0588 243 PANTHER DISEASE RESISTANCE PROTEIN RP 1 149 IPR044974 GO:0006952
Ssu9g0588 243 Gene3D - 1 121 IPR027417 -
Ssu9g0588 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 150 IPR027417 -
Ssu9g0588 243 Pfam NB-ARC domain 1 146 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0588 Ssu-Chr9 27422184 27426929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0588 3 156 WRKY Transcription Factor Family AT4G12020 25.904 7.98e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0588 - - gmx:100803330 265.388